Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors

Transcriptional dynamics ofPhytophthora infestansduring sequential stages of hemibiotrophic infection of tomato

(2015) Andrea P. Zuluaga et al.   MOLECULAR PLANT PATHOLOGY

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

(2015) A. Maxwell Burroughs et al.   NUCLEIC ACIDS RESEARCH

JPred4: a protein secondary structure prediction server

(2015) Alexey Drozdetskiy et al.   NUCLEIC ACIDS RESEARCH

A Virulence Essential CRN Effector of Phytophthora capsici Suppresses Host Defense and Induces Cell Death in Plant Nucleus

(2015) Joseph Juma Mafurah et al.   PLoS One

Stonefish toxin defines an ancient branch of the perforin-like superfamily

(2015) Andrew M. Ellisdon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fruit flies diversify their offspring in response to parasite infection

(2015) N. D. Singh et al.   SCIENCE

The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases

(2015) Arne Schwelm et al.   Scientific Reports

Resilience of biochemical activity in protein domains in the face of structural divergence

(2014) Dapeng Zhang et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The RNase H-like superfamily: new members, comparative structural analysis and evolutionary classification

(2014) Karolina A. Majorek et al.   NUCLEIC ACIDS RESEARCH

The Tn7 transposition regulator TnsC interacts with the transposase subunit TnsB and target selector TnsD

(2014) K. Y. Choi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single Nucleus Genome Sequencing Reveals High Similarity among Nuclei of an Endomycorrhizal Fungus

(2014) Kui Lin et al.   PLoS Genetics

Effectors and Effector Delivery in Magnaporthe oryzae

(2014) Shijie Zhang et al.   PLoS Pathogens

Cell and Developmental Biology of Arbuscular Mycorrhiza Symbiosis

(2013) Caroline Gutjahr et al.   Annual Review of Cell and Developmental Biology

Malaria-Infected Erythrocyte-Derived Microvesicles Mediate Cellular Communication within the Parasite Population and with the Host Immune System

(2013) Pierre-Yves Mantel et al.   Cell Host & Microbe

Identification and Characterisation CRN Effectors in Phytophthora capsici Shows Modularity and Functional Diversity

(2013) Remco Stam et al.   PLoS One

Gene Duplication and Fragment Recombination Drive Functional Diversification of a Superfamily of Cytoplasmic Effectors in Phytophthora sojae

(2013) Danyu Shen et al.   PLoS One

VapC20 of Mycobacterium tuberculosis cleaves the Sarcin–Ricin loop of 23S rRNA

(2013) Kristoffer S. Winther et al.   Nature Communications

Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus

(2013) Remco Stam et al.   Frontiers in Plant Science

Mechanisms and Evolution of Virulence in Oomycetes

(2012) Rays H.Y. Jiang et al.   Annual Review of Phytopathology

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics

(2012) Dapeng Zhang et al.   Biology Direct

Secretion, delivery and function of oomycete effector proteins

(2012) Stephan Wawra et al.   CURRENT OPINION IN MICROBIOLOGY

The Magnaporthe oryzae Effector AvrPiz-t Targets the RING E3 Ubiquitin Ligase APIP6 to Suppress Pathogen-Associated Molecular Pattern-Triggered Immunity in Rice

(2012) C.-H. Park et al.   PLANT CELL

Substrate-Specific Gene Expression in Batrachochytrium dendrobatidis, the Chytrid Pathogen of Amphibians

(2012) Erica Bree Rosenblum et al.   PLoS One

Crystal structure of the TLDc domain of oxidation resistance protein 2 from zebrafish

(2012) Mickaël Blaise et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The Irish Potato Famine Pathogen Phytophthora infestans Translocates the CRN8 Kinase into Host Plant Cells

(2012) Mireille van Damme et al.   PLoS Pathogens

Gene flow and biological conflict systems in the origin and evolution of eukaryotes

(2012) L. Aravind et al.   Frontiers in Cellular and Infection Microbiology

How filamentous pathogens co-opt plants: the ins and outs of fungal effectors

(2011) Ronnie de Jonge et al.   CURRENT OPINION IN PLANT BIOLOGY

Involvement of the GspAB Complex in Assembly of the Type II Secretion System Secretin of Aeromonas and Vibrio Species

(2011) T. G. Strozen et al.   JOURNAL OF BACTERIOLOGY

Insights from the architecture of the bacterial transcription apparatus

(2011) Lakshminarayan M. Iyer et al.   JOURNAL OF STRUCTURAL BIOLOGY

Plasmodiophora brassicae: a review of an emerging pathogen of the Canadian canola (Brassica napus) crop

(2011) SHEAU-FANG HWANG et al.   MOLECULAR PLANT PATHOLOGY

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems

(2011) Dapeng Zhang et al.   NUCLEIC ACIDS RESEARCH

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems

(2011) Lakshminarayan M. Iyer et al.   NUCLEIC ACIDS RESEARCH

Diversity of bacterial type II toxin–antitoxin systems: a comprehensive search and functional analysis of novel families

(2011) Raphaël Leplae et al.   NUCLEIC ACIDS RESEARCH

Molecular determinants of origin discrimination by Orc1 initiators in archaea

(2011) Erin C. Dueber et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Selfish genetic elements, genetic conflict, and evolutionary innovation

(2011) J. H. Werren   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Transition to Pathogenicity in Chytrid Fungi

(2011) Suzanne Joneson et al.   PLoS Pathogens

Phytophthora sojae Avirulence Effector Avr3b is a Secreted NADH and ADP-ribose Pyrophosphorylase that Modulates Plant Immunity

(2011) Suomeng Dong et al.   PLoS Pathogens

OST-HTH: a novel predicted RNA-binding domain

(2010) Vivek Anantharaman et al.   Biology Direct

Exosomes and other microvesicles in infection biology: organelles with unanticipated phenotypes

(2010) Judith Maxwell Silverman et al.   CELLULAR MICROBIOLOGY

Toxin–antitoxin systems: why so many, what for?

(2010) Laurence Van Melderen   CURRENT OPINION IN MICROBIOLOGY

Conflicts Targeting Epigenetic Systems and Their Resolution by Cell Death: Novel Concepts for Methyl-Specific and Other Restriction Systems

(2010) K. Ishikawa et al.   DNA RESEARCH

Phage Mu Transposition Immunity: Protein Pattern Formation along DNA by a Diffusion-Ratchet Mechanism

(2010) Yong-Woon Han et al.   MOLECULAR CELL

A widespread family of polymorphic contact-dependent toxin delivery systems in bacteria

(2010) Stephanie K. Aoki et al.   NATURE

Two Host Cytoplasmic Effectors Are Required for Pathogenesis of Phytophthora sojae by Suppression of Host Defenses

(2010) T. Liu et al.   PLANT PHYSIOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Structural basis of oligomerization in septin-like GTPase of immunity-associated protein 2 (GIMAP2)

(2010) D. Schwefel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient class of translocated oomycete effectors targets the host nucleus

(2010) S. Schornack et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SAM as a protein interaction domain involved in developmental regulation

(2010) Jörg Schultz et al.   PROTEIN SCIENCE

Fungal Effector Proteins

(2009) Ioannis Stergiopoulos et al.   Annual Review of Phytopathology

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

A new family of polymerases related to superfamily A DNA polymerases and T7-like DNA-dependent RNA polymerases

(2008) Lakshminarayan M Iyer et al.   Biology Direct

PROMALS3D: a tool for multiple protein sequence and structure alignments

(2008) Jimin Pei et al.   NUCLEIC ACIDS RESEARCH

The maternal-effect, selfish genetic element Medea is associated with a composite Tc1 transposon

(2008) M. D. Lorenzen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Host-cell invasion by malaria parasites: insights from Plasmodium and Toxoplasma

(2008) Jake Baum et al.   TRENDS IN PARASITOLOGY