SimpleSynteny: a web-based tool for visualization of microsynteny across multiple species

Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level

(2015) Thies Gehrmann et al.   BIOINFORMATICS

SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand

(2015) Haibao Tang et al.   Genome Biology and Evolution

Evaluating synteny for improved comparative studies

(2014) C. G. Ghiurcuta et al.   BIOINFORMATICS

Dating the Diversification of the Major Lineages of Ascomycota (Fungi)

(2013) María Prieto et al.   PLoS One

A web-based multi-genome synteny viewer for customized data

(2012) Kashi V Revanna et al.   BMC BIOINFORMATICS

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

(2012) Richard J O'Connell et al.   NATURE GENETICS

i-ADHoRe 3.0—fast and sensitive detection of genomic homology in extremely large data sets

(2011) Sebastian Proost et al.   NUCLEIC ACIDS RESEARCH

SyMAP v3.4: a turnkey synteny system with application to plant genomes

(2011) Carol Soderlund et al.   NUCLEIC ACIDS RESEARCH

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi

(2011) James K Hane et al.   GENOME BIOLOGY

DRIMM-Synteny: decomposing genomes into evolutionary conserved segments

(2010) Son K. Pham et al.   BIOINFORMATICS

BioRuby: bioinformatics software for the Ruby programming language

(2010) N. Goto et al.   BIOINFORMATICS

Visualizing genomes: techniques and challenges

(2010) Cydney B Nielsen et al.   NATURE METHODS

Synteny and Collinearity in Plant Genomes

(2008) H. Tang et al.   SCIENCE