Habitat conditions and phenological tree traits overrule the influence of tree genotype in the needle mycobiome-Picea glaucasystem at an arctic treeline ecotone

A cost-effective and efficient strategy for Illumina sequencing of fungal communities: A case study of beech endophytes identified elevation as main explanatory factor for diversity and community composition

(2016) A.B. Siddique et al.   Fungal Ecology

Needle age and season influence photosynthetic temperature response and total annual carbon uptake in maturePicea marianatrees

(2015) Anna M. Jensen et al.   ANNALS OF BOTANY

The rise of Ramularia from the Mycosphaerella labyrinth

(2015) Sandra Isabel Rodrigues Videira et al.   Fungal Biology

Wild trees in the Amazon basin harbor a great diversity of beneficial endosymbiotic fungi: is this evidence of protective mutualism?

(2015) Romina Gazis et al.   Fungal Ecology

Scraping the bottom of the barrel: are rare high throughput sequences artifacts?

(2015) Shawn P. Brown et al.   Fungal Ecology

Temporal variation overshadows the response of leaf litter microbial communities to simulated global change

(2015) Kristin L Matulich et al.   ISME Journal

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

(2015) R. Henrik Nilsson et al.   MICROBES AND ENVIRONMENTS

The importance of the microbiome of the plant holobiont

(2015) Philippe Vandenkoornhuyse et al.   NEW PHYTOLOGIST

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

(2014) Susannah J Salter et al.   BMC BIOLOGY

Plant traits and taxonomy drive host associations in tropical phyllosphere fungal communities

(2014) Steven W. Kembel et al.   Botany

The effects of phenotypic plasticity and local adaptation on forecasts of species range shifts under climate change

(2014) Fernando Valladares et al.   ECOLOGY LETTERS

The community of needle endophytes reflects the current physiological state of Norway spruce

(2014) Tiina Rajala et al.   Fungal Biology

Relocation, high-latitude warming and host genetic identity shape the foliar fungal microbiome of poplars

(2014) Miklós Bálint et al.   MOLECULAR ECOLOGY

The rich and the sensitive: diverse fungal communities change functionally with the warming Arctic

(2014) Ari Jumpponen et al.   MOLECULAR ECOLOGY

Twenty-first century mycology: a diverse, collaborative, and highly relevant science

(2014) Peter Kennedy et al.   NEW PHYTOLOGIST

Soil water availability strongly alters the community composition of soil protists

(2014) Geisen Stefan et al.   PEDOBIOLOGIA

The fungal leaf endophyte Paraconiothyrium variabile specifically metabolizes the host-plant metabolome for its own benefit

(2014) Yuan Tian et al.   PHYTOCHEMISTRY

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

(2014) Dylan P. Smith et al.   PLoS One

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

An Illumina metabarcoding pipeline for fungi

(2014) Miklós Bálint et al.   Ecology and Evolution

Snow Fungi—Induced Mortality of Pinus cembra at the Alpine Treeline: Evidence from Plantations

(2013) Ignacio Barbeito et al.   ARCTIC ANTARCTIC AND ALPINE RESEARCH

Endophyte communities vary in the needles of Norway spruce clones

(2013) Tiina Rajala et al.   Fungal Biology

Factors shaping community structure of endophytic fungi–evidence from the Pinus-Viscum-system

(2013) Derek Peršoh   FUNGAL DIVERSITY

Soil warming alters microbial substrate use in alpine soils

(2013) Kathrin Streit et al.   GLOBAL CHANGE BIOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Arctic root-associated fungal community composition reflects environmental filtering

(2013) Rakel Blaalid et al.   MOLECULAR ECOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Host Genotype Shapes the Foliar Fungal Microbiome of Balsam Poplar (Populus balsamifera)

(2013) Miklós Bálint et al.   PLoS One

Illumina metabarcoding of a soil fungal community

(2013) Philipp-André Schmidt et al.   SOIL BIOLOGY & BIOCHEMISTRY

How are plant and fungal communities linked to each other in belowground ecosystems? A massively parallel pyrosequencing analysis of the association specificity of root-associated fungi and their host plants

(2013) Hirokazu Toju et al.   Ecology and Evolution

Do limiting factors at Alaskan treelines shift with climatic regimes?

(2012) B Ohse et al.   Environmental Research Letters

Long-term warming alters the composition of Arctic soil microbial communities

(2012) Julie R. Deslippe et al.   FEMS MICROBIOLOGY ECOLOGY

Xerotolerant foliar endophytic fungi of Populus euphratica from the Tarim River basin, Central China are conspecific to endophytic ITS phylotypes of Populus tremula from temperate Europe

(2012) Martin Unterseher et al.   FUNGAL DIVERSITY

Foliar nutrients shape fungal endophyte communities in Western white pine (Pinus monticola) with implications for white-tailed deer herbivory

(2012) Beau G. Larkin et al.   Fungal Ecology

Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica)

(2012) Tristan Cordier et al.   Fungal Ecology

Genetic host-tree effects on the ectomycorrhizal community and root characteristics of Norway spruce

(2012) S. M. Velmala et al.   MYCORRHIZA

The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica ) varies significantly along an elevation gradient

(2012) Tristan Cordier et al.   NEW PHYTOLOGIST

The International Nucleotide Sequence Database Collaboration

(2012) Y. Nakamura et al.   NUCLEIC ACIDS RESEARCH

Nine years of CO2 enrichment at the alpine treeline stimulates soil respiration but does not alter soil microbial communities

(2012) Frank Hagedorn et al.   SOIL BIOLOGY & BIOCHEMISTRY

mvabund- anRpackage for model-based analysis of multivariate abundance data

(2012) Yi Wang et al.   Methods in Ecology and Evolution

Global assessment of experimental climate warming on tundra vegetation: heterogeneity over space and time

(2011) Sarah C. Elmendorf et al.   ECOLOGY LETTERS

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

An arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA

(2011) József Geml et al.   JOURNAL OF BIOGEOGRAPHY

Endophytic fungal community in stems and leaves of plants from desert areas in China

(2011) Yue Sun et al.   MYCOLOGICAL PROGRESS

Rapid Range Shifts of Species Associated with High Levels of Climate Warming

(2011) I.-C. Chen et al.   SCIENCE

Distance-based multivariate analyses confound location and dispersion effects

(2011) David I. Warton et al.   Methods in Ecology and Evolution

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology

(2010) MARTIN UNTERSEHER et al.   MOLECULAR ECOLOGY

Potential link between plant and fungal distributions in a dipterocarp rainforest: community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone

(2009) Kabir G. Peay et al.   NEW PHYTOLOGIST

Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperateQuercus macrocarpaphyllosphere

(2009) A. Jumpponen et al.   NEW PHYTOLOGIST

Ecology of the rare microbial biosphere of the Arctic Ocean

(2009) Pierre E. Galand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Leaf phenology sensitivity to temperature in European trees: Do within-species populations exhibit similar responses?

(2008) Yann Vitasse et al.   AGRICULTURAL AND FOREST METEOROLOGY

Phyllosphere microbiology with special reference to diversity and plant genotype

(2008) J.M. Whipps et al.   JOURNAL OF APPLIED MICROBIOLOGY