Long-read sequencing reveals the shell microbiome of apparently healthy American lobsters Homarus americanus from Atlantic Canada

Carapace microbiota in American lobsters (Homarus americanus) associated with epizootic shell disease and the green gland

(2023) Anna Schaubeck et al.   Frontiers in Microbiology

Interspecies and spatial differences in the shell microbiome of Atlantic rock crab Cancer irrotatus and European green crab Carcinus maenas from Atlantic Canada

(2023) Svenja Koepper et al.   Frontiers in Marine Science

Shell Disease Syndrome Is Associated with Reduced and Shifted Epibacterial Diversity on the Carapace of the Crustacean Cancer pagurus

(2022) Nils Bergen et al.   Microbiology Spectrum

Vaginal microbiome: normalcy vs dysbiosis

(2021) Viqar Sayeed Saraf et al.   ARCHIVES OF MICROBIOLOGY

Spatial and temporal patterns in the sex ratio of American lobsters (Homarus americanus) in southwestern Nova Scotia, Canada

(2021) S. Koepper et al.   Scientific Reports

Microbiome Shifts Associated With the Introduction of Wild Atlantic Horseshoe Crabs (Limulus polyphemus) Into a Touch-Tank Exhibit

(2020) Ariel D. Friel et al.   Frontiers in Microbiology

Healthy microbiome: a key to successful and sustainable shrimp aquaculture

(2020) Riya Rajeev et al.   Reviews in Aquaculture

Haemolymph microbiome of the cultured spiny lobster Panulirus ornatus at different temperatures

(2019) Mei C. Ooi et al.   Scientific Reports

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Diversity and flexibility of the bacterial communities on Cancer pagurus at different temperatures

(2019) Philipp Kraemer et al.   JOURNAL OF SEA RESEARCH

Increasing prevalence of epizootic shell disease in American lobster from the nearshore Gulf of Maine

(2018) Kathleen M Reardon et al.   BULLETIN OF MARINE SCIENCE

Aquimarina algiphila sp. nov., a chitin degrading bacterium isolated from the red alga Tichocarpus crinitus

(2018) Olga I. Nedashkovskaya et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Temperature Driven Changes in Benthic Bacterial Diversity Influences Biogeochemical Cycling in Coastal Sediments

(2018) Natalie Hicks et al.   Frontiers in Microbiology

Summer shifts of bacterial communities associated with the invasive brown seaweed Sargassum muticum are location and tissue dependent

(2018) Alexandra Serebryakova et al.   PLoS One

Real-time PCR assay for Aquimarina macrocephali subsp. homaria and its distribution in shell disease lesions of Homarus americanus, Milne-Edwards, 1837, and environmental samples

(2017) Robert A. Quinn et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Comparative analysis of DNA extraction methods to study the body surface microbiota of insects: A case study with ant cuticular bacteria

(2017) Caroline Birer et al.   Molecular Ecology Resources

Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data

(2017) Nicolas F. Fernandez et al.   Scientific Data

Microbiome Helper: a Custom and Streamlined Workflow for Microbiome Research

(2017) André M. Comeau et al.   mSystems

Microbiome Dynamics in a Shrimp Grow-out Pond with Possible Outbreak of Acute Hepatopancreatic Necrosis Disease

(2017) Wei-Yu Chen et al.   Scientific Reports

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Microbial Dysbiosis: Rethinking Disease in Marine Ecosystems

(2016) Suhelen Egan et al.   Frontiers in Microbiology

Host Differentially Expressed Genes During Association With Its Defensive Endosymbiont

(2016) Meril Mathew et al.   BIOLOGICAL BULLETIN

Changes in microbial communities in coastal sediments along natural CO2gradients at a volcanic vent in Papua New Guinea

(2015) Felix F. Raulf et al.   ENVIRONMENTAL MICROBIOLOGY

The plant microbiome explored: implications for experimental botany

(2015) Gabriele Berg et al.   JOURNAL OF EXPERIMENTAL BOTANY

Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome

(2015) Shirley Bikel et al.   Computational and Structural Biotechnology Journal

Structure and Functions of the Gut Microbiome

(2014) Suchita Panda et al.   Endocrine Metabolic & Immune Disorders-Drug Targets

Complex etiologies of emerging diseases in lobsters (Homarus americanus) from Long Island Sound

(2013) Jeffrey D. Shields   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Bacterial communities associated with lesions of two forms of shell disease in the American lobster (Homarus americanus, Milne Edwards) from Atlantic Canada

(2013) Robert A. Quinn et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Rhodobacteraceaeare the key members of the microbial community of the initial biofilm formed in Eastern Mediterranean coastal seawater

(2013) Hila Elifantz et al.   FEMS MICROBIOLOGY ECOLOGY

Epizootic shell disease in American lobsters Homarus americanus in southern New England: past, present and future

(2012) KM Castro et al.   DISEASES OF AQUATIC ORGANISMS

Lesion bacterial communities in American lobsters with diet-induced shell disease

(2012) RA Quinn et al.   DISEASES OF AQUATIC ORGANISMS

Investigation of Epizootic Shell Disease in American Lobsters (Homarus americanus) from Long Island Sound: I. Characterization of Associated Microbial Communities

(2012) Sheryl L. Bell et al.   JOURNAL OF SHELLFISH RESEARCH

The Status of the Southern New England Lobster Stock

(2012) Penelope Howell   JOURNAL OF SHELLFISH RESEARCH

Observations of Epizootic Shell Disease in American Lobsters,Homarus americanus, in Southern New England

(2012) Kathleen M. Castro et al.   JOURNAL OF SHELLFISH RESEARCH

Dysbiosis in Epizootic Shell Disease of the American Lobster (Homarus americanus)

(2012) Norman J. Meres et al.   JOURNAL OF SHELLFISH RESEARCH

Bacterial Communities Associated with Lesions of Shell Disease in the American Lobster,Homarus americanusMilne-Edwards

(2012) Andrei Y. Chistoserdov et al.   JOURNAL OF SHELLFISH RESEARCH

The Second Skin: Ecological Role of Epibiotic Biofilms on Marine Organisms

(2012) Martin Wahl et al.   Frontiers in Microbiology

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Role of gut microbiota in the control of energy and carbohydrate metabolism

(2010) Koen Venema   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

High-Throughput Quantitative Analysis of the Human Intestinal Microbiota with a Phylogenetic Microarray

(2009) O. Paliy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

(2009) Ivaylo I. Ivanov et al.   CELL

Microbial diversity of mid-stage Palinurid phyllosoma from Great Barrier Reef waters

(2008) M.S. Payne et al.   JOURNAL OF APPLIED MICROBIOLOGY