Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data

shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics

(2017) Bohdan B. Khomtchouk et al.   PLoS One

Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data

(2016) Guillaume Devailly et al.   BIOINFORMATICS

GEN3VA: aggregation and analysis of gene expression signatures from related studies

(2016) Gregory W. Gundersen et al.   BMC BIOINFORMATICS

Mass cytometry: blessed with the curse of dimensionality

(2016) Evan W Newell et al.   NATURE IMMUNOLOGY

The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins

(2016) Andrew D. Rouillard et al.   Database-The Journal of Biological Databases and Curation

GEO2Enrichr: browser extension and server app to extract gene sets from GEO and analyze them for biological functions: Fig. 1.

(2015) Gregory W. Gundersen et al.   BIOINFORMATICS

InCHlib – interactive cluster heatmap for web applications

(2014) Ctibor Škuta et al.   Journal of Cheminformatics

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

(2013) Edward Y Chen et al.   BMC BIOINFORMATICS

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

(2013) El-ad David Amir et al.   NATURE BIOTECHNOLOGY

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

(2012) Jordi Barretina et al.   NATURE

D³ Data-Driven Documents

(2011) M. Bostock et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

(2011) Peng Qiu et al.   NATURE BIOTECHNOLOGY

Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps

(2011) Christian Perez-Llamas et al.   PLoS One

A survey of visualization tools for biological network analysis

(2008) Georgios A Pavlopoulos et al.   BioData Mining