Whole-genome characterization of common rotavirus strains circulating in Vellore, India from 2002 to 2017: emergence of non-classical genomic constellations

Aetiology and incidence of diarrhoea requiring hospitalisation in children under 5 years of age in 28 low-income and middle-income countries: findings from the Global Pediatric Diarrhea Surveillance network

(2022) Adam L Cohen et al.   BMJ Global Health

At Least Seven Distinct Rotavirus Genotype Constellations in Bats with Evidence of Reassortment and Zoonotic Transmissions

(2021) Ceren Simsek et al.   mBio

Comparative genomic analysis of genogroup 1 and genogroup 2 rotaviruses circulating in seven US cities, 2014-2016

(2021) Mathew D Esona et al.   Virus Evolution

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

(2021) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Rotavirus Strain Distribution before and after Introducing Rotavirus Vaccine in India

(2021) Tintu Varghese et al.   Pathogens

Whole Genome Analysis of Human Rotaviruses Reveals Single Gene Reassortant Rotavirus Strains in Zambia

(2021) Wairimu M. Maringa et al.   Viruses-Basel

IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Diversity of rotavirus genotypes circulating in children

(2020) Sidhartha Giri et al.   BMC INFECTIOUS DISEASES

Genetic analysis of rotavirus G2P[4] strains in Pune, Western India: circulation of a novel reassortant bearing E6 NSP4 genotype

(2018) Gauri N. Pradhan et al.   ARCHIVES OF VIROLOGY

Characterization of unusual DS-1-like G3P[8] rotavirus strains in children with diarrhea in Japan

(2018) Satoshi Komoto et al.   JOURNAL OF MEDICAL VIROLOGY

Estimates of the global, regional, and national morbidity, mortality, and aetiologies of diarrhoea in 195 countries: a systematic analysis for the Global Burden of Disease Study 2016

(2018) Christopher Troeger et al.   LANCET INFECTIOUS DISEASES

Complex reassortment events of unusual G9P[4] rotavirus strains in India between 2011 and 2013

(2017) Yen Hai Doan et al.   INFECTION GENETICS AND EVOLUTION

Emergence of Double- and Triple-Gene Reassortant G1P[8] Rotaviruses Possessing a DS-1-Like Backbone after Rotavirus Vaccine Introduction in Malawi

(2017) Khuzwayo C. Jere et al.   JOURNAL OF VIROLOGY

Estimates of global, regional, and national morbidity, mortality, and aetiologies of diarrhoeal diseases: a systematic analysis for the Global Burden of Disease Study 2015

(2017) Christopher Troeger et al.   LANCET INFECTIOUS DISEASES

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Genotype distribution of Group A rotavirus from southern India, 2005–2016

(2017) Sudhir Babji et al.   VACCINE

Equine-like G3 rotavirus in Hungary, 2015 – Is it a novel intergenogroup reassortant pandemic strain?

(2016) Renáta Dóró et al.   ACTA MICROBIOLOGICA ET IMMUNOLOGICA HUNGARICA

Evolution of DS-1-like G1P[8] double-gene reassortant rotavirus A strains causing gastroenteritis in children in Vietnam in 2012/2013

(2016) Toyoko Nakagomi et al.   ARCHIVES OF VIROLOGY

High Prevalence of G12 Human Rotaviruses in Children with Gastroenteritis in Myanmar

(2016) Tomihiko Ide et al.   JAPANESE JOURNAL OF INFECTIOUS DISEASES

Molecular characterization of emerging G9P[4] rotavirus strains possessing a rare E6 NSP4 or T1 NSP3 genotype on a genogroup-2 backbone using a refined classification framework

(2016) Gauri N. Pradhan et al.   JOURNAL OF GENERAL VIROLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reassortment of Human and Animal Rotavirus Gene Segments in Emerging DS-1-Like G1P[8] Rotavirus Strains

(2016) Satoshi Komoto et al.   PLoS One

Zoonotic transmission of rotavirus: surveillance and control

(2015) Renáta Dóró et al.   Expert Review of Anti-Infective Therapy

Genome-Wide Evolutionary Analyses of G1P[8] Strains Isolated Before and After Rotavirus Vaccine Introduction

(2015) Mark Zeller et al.   Genome Biology and Evolution

G1P[8] species A rotavirus over 27 years – Pre- and post-vaccination eras – in Brazil: Full genomic constellation analysis and no evidence for selection pressure by Rotarix® vaccine

(2015) Marcelle Figueira Marques da Silva et al.   INFECTION GENETICS AND EVOLUTION

Emerging OP354-Like P[8] Rotaviruses Have Rapidly Dispersed from Asia to Other Continents

(2015) Mark Zeller et al.   MOLECULAR BIOLOGY AND EVOLUTION

AliView: a fast and lightweight alignment viewer and editor for large datasets

(2014) Anders Larsson   BIOINFORMATICS

Prevalence of rotavirus diarrhea among hospitalized under-five children

(2014) M. A. Mathew et al.   INDIAN PEDIATRICS

Spread and predominance in Japan of novel G1P[8] double-reassortant rotavirus strains possessing a DS-1-like genotype constellation typical of G2P[4] strains

(2014) Yoshiki Fujii et al.   INFECTION GENETICS AND EVOLUTION

Comparative genomic analysis of genogroup 1 (Wa-like) rotaviruses circulating in the USA, 2006–2009

(2014) Sunando Roy et al.   INFECTION GENETICS AND EVOLUTION

Absence of Genetic Differences among G10P[11] Rotaviruses Associated with Asymptomatic and Symptomatic Neonatal Infections in Vellore, India

(2014) M. H. Libonati et al.   JOURNAL OF VIROLOGY

Molecular Epidemiology of Contemporary G2P[4] Human Rotaviruses Cocirculating in a Single U.S. Community: Footprints of a Globally Transitioning Genotype

(2014) A. F. Dennis et al.   JOURNAL OF VIROLOGY

Rotavirus diversity among diarrheal children in Delhi, India during 2007–2012

(2014) Vasundhara Razdan Tiku et al.   VACCINE

A multicenter prospective hospital-based surveillance to estimate the burden of rotavirus gastroenteritis in children less than five years of age in India

(2014) T. Saluja et al.   VACCINE

Human G3P[4] rotavirus obtained in Japan, 2013, possibly emerged through a human–equine rotavirus reassortment event

(2014) Rungnapa Malasao et al.   VIRUS GENES

Diversity of circulating rotavirus strains in children hospitalized with diarrhea in India, 2005–2009

(2013) Gagandeep Kang et al.   VACCINE

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Selection and evolutionary analysis in the nonstructural protein NSP2 of rotavirus A

(2012) Nicole C. Donker et al.   INFECTION GENETICS AND EVOLUTION

Vaccine-derived NSP2 segment in rotaviruses from vaccinated children with gastroenteritis in Nicaragua

(2012) Filemón Bucardo et al.   INFECTION GENETICS AND EVOLUTION

Emergence of an Unusual Genotype of Rotavirus in Andaman and Nicobar Islands, India

(2012) Rajesh Reesu et al.   INTERVIROLOGY

Symptomatic Infection and Detection of Vaccine and Vaccine-Reassortant Rotavirus Strains in 5 Children: A Case Series

(2012) J. A. Boom et al.   JOURNAL OF INFECTIOUS DISEASES

Phylogenetic and computational structural analysis of VP7 gene of group a human rotavirus G1P[8] strains obtained in Sapporo, Japan from 1987 to 2000

(2012) Yoshinobu Nagaoka et al.   JOURNAL OF MEDICAL VIROLOGY

Diversity and Relationships of Cocirculating Modern Human Rotaviruses Revealed Using Large-Scale Comparative Genomics

(2012) S. M. McDonald et al.   JOURNAL OF VIROLOGY

Whole-genomic analysis of rotavirus strains: current status and future prospects

(2011) Souvik Ghosh et al.   Future Microbiology

Whole genome analysis of multiple rotavirus strains from a single stool specimen using sequence-independent amplification and 454® pyrosequencing reveals evidence of intergenotype genome segment recombination

(2011) Khuzwayo C. Jere et al.   INFECTION GENETICS AND EVOLUTION

Multiple reassortment and interspecies transmission events contribute to the diversity of feline, canine and feline/canine-like human group A rotavirus strains

(2011) Jelle Matthijnssens et al.   INFECTION GENETICS AND EVOLUTION

Surveillance and molecular characterization of rotavirus strains circulating in Manipur, North-Eastern India: Increasing prevalence of emerging G12 strains

(2010) Anupam Mukherjee et al.   INFECTION GENETICS AND EVOLUTION

Phylodynamic Analyses of Rotavirus Genotypes G9 and G12 Underscore Their Potential for Swift Global Spread

(2010) J. Matthijnssens et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic diversity of group A rotavirus strains in patients aged 1–36 months admitted for acute watery diarrhoea in northern India: a hospital-based study

(2009) V. Mishra et al.   CLINICAL MICROBIOLOGY AND INFECTION

Rotaviruses: From Pathogenesis to Vaccination

(2009) Harry B. Greenberg et al.   GASTROENTEROLOGY

Genomic Characterization of Nontypeable Rotaviruses and Detection of a Rare G8 Strain in Delhi, India

(2009) S. Sharma et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Are Human P[14] Rotavirus Strains the Result of Interspecies Transmissions from Sheep or Other Ungulates That Belong to the Mammalian Order Artiodactyla?

(2009) J. Matthijnssens et al.   JOURNAL OF VIROLOGY

Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments

(2008) Jelle Matthijnssens et al.   ARCHIVES OF VIROLOGY

Use of sequence analysis of the VP4 gene to classify recent Vietnamese rotavirus isolates

(2008) T.A. Nguyen et al.   CLINICAL MICROBIOLOGY AND INFECTION

Full Genome-Based Classification of Rotaviruses Reveals a Common Origin between Human Wa-Like and Porcine Rotavirus Strains and Human DS-1-Like and Bovine Rotavirus Strains

(2008) J. Matthijnssens et al.   JOURNAL OF VIROLOGY