Whole-transcriptome brain expression and exon-usage profiling in major depression and suicide: evidence for altered glial, endothelial and ATPase activity
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Title
Whole-transcriptome brain expression and exon-usage profiling in major depression and suicide: evidence for altered glial, endothelial and ATPase activity
Authors
Keywords
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Journal
MOLECULAR PSYCHIATRY
Volume 22, Issue 5, Pages 760-773
Publisher
Springer Nature
Online
2016-08-16
DOI
10.1038/mp.2016.130
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Note: Only part of the references are listed.- Meta-Analysis of Cytokines and Chemokines in Suicidality: Distinguishing Suicidal Versus Nonsuicidal Patients
- (2015) Carmen Black et al. BIOLOGICAL PSYCHIATRY
- A meta-analysis of cytokines in suicidal behavior
- (2015) Déborah Ducasse et al. BRAIN BEHAVIOR AND IMMUNITY
- Sex differences in glutamate receptor gene expression in major depression and suicide
- (2015) A L Gray et al. MOLECULAR PSYCHIATRY
- Glial fibrillary acidic protein is differentially expressed across cortical and subcortical regions in healthy brains and downregulated in the thalamus and caudate nucleus of depressed suicides
- (2015) S G Torres-Platas et al. MOLECULAR PSYCHIATRY
- Associations with depression
- (2015) Patrick F. Sullivan NATURE
- Sparse whole-genome sequencing identifies two loci for major depressive disorder
- (2015) Na Cai et al. NATURE
- Isoform-level brain expression profiling of the spermidine/spermine N1-Acetyltransferase1 ( SAT1 ) gene in major depression and suicide
- (2015) Spiro P. Pantazatos et al. NEUROBIOLOGY OF DISEASE
- Imaging robust microglial activation after lipopolysaccharide administration in humans with PET
- (2015) Christine M. Sandiego et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Low IL-8 is associated with anxiety in suicidal patients: genetic variation and decreased protein levels
- (2014) S. Janelidze et al. ACTA PSYCHIATRICA SCANDINAVICA
- Evidence for increased microglial priming and macrophage recruitment in the dorsal anterior cingulate white matter of depressed suicides
- (2014) Susana G. Torres-Platas et al. BRAIN BEHAVIOR AND IMMUNITY
- Microglia of Prefrontal White Matter in Suicide
- (2014) Tatiana P. Schnieder et al. JOURNAL OF NEUROPATHOLOGY AND EXPERIMENTAL NEUROLOGY
- Angiogenesis inhibition and depression in older men
- (2014) Osvaldo Almeida et al. JOURNAL OF PSYCHIATRY & NEUROSCIENCE
- Astrocytic abnormalities and global DNA methylation patterns in depression and suicide
- (2014) C Nagy et al. MOLECULAR PSYCHIATRY
- Deficient neuron-microglia signaling results in impaired functional brain connectivity and social behavior
- (2014) Yang Zhan et al. NATURE NEUROSCIENCE
- Performance comparison of SNP detection tools with illumina exome sequencing data—an assessment using both family pedigree information and sample-matched SNP array data
- (2014) Ming Yi et al. NUCLEIC ACIDS RESEARCH
- Human Astrocytes: Secretome Profiles of Cytokines and Chemokines
- (2014) Sung S. Choi et al. PLoS One
- The emerging era of genomic data integration for analyzing splice isoform function
- (2014) Hong-Dong Li et al. TRENDS IN GENETICS
- Microglia trigger astrocyte-mediated neuroprotection via purinergic gliotransmission
- (2014) Youichi Shinozaki et al. Scientific Reports
- Genome-Wide Methylation Changes in the Brains of Suicide Completers
- (2013) Benoit Labonté et al. AMERICAN JOURNAL OF PSYCHIATRY
- Is there an empirical link between impulsivity and suicidality in bipolar disorders? A review of the current literature and the potential psychological implications of the relationship
- (2013) Hannah B Watkins et al. BIPOLAR DISORDERS
- The neuroinflammation marker translocator protein is not elevated in individuals with mild-to-moderate depression: A [11C]PBR28 PET study
- (2013) Jonas Hannestad et al. BRAIN BEHAVIOR AND IMMUNITY
- The Involvement of MicroRNAs in Major Depression, Suicidal Behavior, and Related Disorders: A Focus on miR-185 and miR-491-3p
- (2013) Gianluca Serafini et al. CELLULAR AND MOLECULAR NEUROBIOLOGY
- Astrocyte Pathology in Major Depressive Disorder: Insights from Human Postmortem Brain Tissue
- (2013) Grazyna Rajkowska et al. CURRENT DRUG TARGETS
- Regulatory role of miRNAs in polyamine gene expression in the prefrontal cortex of depressed suicide completers
- (2013) Juan Pablo Lopez et al. INTERNATIONAL JOURNAL OF NEUROPSYCHOPHARMACOLOGY
- Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing
- (2013) S Mostafavi et al. MOLECULAR PSYCHIATRY
- Humanin: a harbinger of mitochondrial-derived peptides?
- (2013) Changhan Lee et al. TRENDS IN ENDOCRINOLOGY AND METABOLISM
- Software for Computing and Annotating Genomic Ranges
- (2013) Michael Lawrence et al. PLoS Computational Biology
- Hippocampal Angiogenesis and Progenitor Cell Proliferation Are Increased with Antidepressant Use in Major Depression
- (2012) Maura Boldrini et al. BIOLOGICAL PSYCHIATRY
- A meta-analysis of differences in IL-6 and IL-10 between people with and without depression: Exploring the causes of heterogeneity
- (2012) Sarah A. Hiles et al. BRAIN BEHAVIOR AND IMMUNITY
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Detecting differential usage of exons from RNA-seq data
- (2012) S. Anders et al. GENOME RESEARCH
- Decreased expression of synapse-related genes and loss of synapses in major depressive disorder
- (2012) Hyo Jung Kang et al. NATURE MEDICINE
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Functions of microglia in the central nervous system – beyond the immune response
- (2012) Hiroaki Wake et al. Neuron Glia Biology
- Altered chemokine levels in the cerebrospinal fluid and plasma of suicide attempters
- (2012) Shorena Janelidze et al. PSYCHONEUROENDOCRINOLOGY
- Low vascular endothelial growth factor and interleukin-8 in cerebrospinal fluid of suicide attempters
- (2012) J Isung et al. Translational Psychiatry
- Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift
- (2012) Pablo Cingolani et al. Frontiers in Genetics
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- (2011) Hiroyuki Takatsu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
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- (2011) Ghanshyam N. Pandey et al. JOURNAL OF PSYCHIATRIC RESEARCH
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- The Impact of Multifunctional Genes on "Guilt by Association" Analysis
- (2011) Jesse Gillis et al. PLoS One
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- (2011) S. Desmyter et al. PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY
- A pilot genome wide association and gene expression array study of suicide with and without major depression
- (2011) Hanga Galfalvy et al. WORLD JOURNAL OF BIOLOGICAL PSYCHIATRY
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- (2010) Helena E. Christiansen et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Gene expression profiling of suicide completers
- (2010) L.M. Fiori et al. EUROPEAN PSYCHIATRY
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Profiling brain expression of the spermidine/spermineN1-acetyltransferase 1 (SAT1) gene in suicide
- (2009) Timothy A. Klempan et al. AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
- P4 ATPases - Lipid flippases and their role in disease
- (2009) Dineke E. Folmer et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
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- (2009) Baby-Periyanayaki Muthusamy et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- Evidence for potential functionality of nuclearly-encoded humanin isoforms
- (2009) Marek Bodzioch et al. GENOMICS
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- (2009) Bridgette D Semple et al. JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM
- Global Brain Gene Expression Analysis Links Glutamatergic and GABAergic Alterations to Suicide and Major Depression
- (2009) Adolfo Sequeira et al. PLoS One
- Blood-Brain Barrier Promotes Differentiation of Human Fetal Neural Precursor Cells
- (2009) Satyan Chintawar et al. STEM CELLS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- The Mystery and Magic of Glia: A Perspective on Their Roles in Health and Disease
- (2008) Ben A. Barres NEURON
- The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
- (2008) U. Nagalakshmi et al. SCIENCE
- Gene expression profiling of major depression and suicide in the prefrontal cortex of postmortem brains
- (2007) Mamoru Tochigi et al. NEUROSCIENCE RESEARCH
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