Rapid Evolution of Virus Sequences in Intrinsically Disordered Protein Regions

Disordered Proteinaceous Machines

(2014) Monika Fuxreiter et al.   CHEMICAL REVIEWS

Two Membrane-Associated Regions within the Nodamura Virus RNA-Dependent RNA Polymerase Are Critical for both Mitochondrial Localization and RNA Replication

(2014) V. U. Gant et al.   JOURNAL OF VIROLOGY

Use of Host-like Peptide Motifs in Viral Proteins Is a Prevalent Strategy in Host-Virus Interactions

(2014) Tzachi Hagai et al.   Cell Reports

Alternative splicing of intrinsically disordered regions and rewiring of protein interactions

(2013) Marija Buljan et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Rapid Evolutionary Dynamics of Structural Disorder as a Potential Driving Force for Biological Divergence in Flaviviruses

(2013) Juan F. Ortiz et al.   Genome Biology and Evolution

Cytoplasmic Granule Formation and Translational Inhibition of Nodaviral RNAs in the Absence of the Double-Stranded RNA Binding Protein B2

(2013) J. E. Petrillo et al.   JOURNAL OF VIROLOGY

The Effect of Gene Overlapping on the Rate of RNA Virus Evolution

(2013) Etienne Simon-Loriere et al.   MOLECULAR BIOLOGY AND EVOLUTION

Marked Variability in the Extent of Protein Disorder within and between Viral Families

(2013) Ravindra Pushker et al.   PLoS One

Signatures of Pleiotropy, Economy and Convergent Evolution in a Domain-Resolved Map of Human–Virus Protein–Protein Interaction Networks

(2013) Sara Garamszegi et al.   PLoS Pathogens

Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life

(2012) Bin Xue et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Sequence Evolution of the Intrinsically Disordered and Globular Domains of a Model Viral Oncoprotein

(2012) Lucía B. Chemes et al.   PLoS One

Versatility from Protein Disorder

(2012) M. M. Babu et al.   SCIENCE

Evolution and disorder

(2011) Celeste J Brown et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Protein disorder—a breakthrough invention of evolution?

(2011) Avner Schlessinger et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Intrinsic Disorder in Ubiquitination Substrates

(2011) Tzachi Hagai et al.   JOURNAL OF MOLECULAR BIOLOGY

Intrinsically disordered regions as affinity tuners in protein–DNA interactions

(2011) Dana Vuzman et al.   Molecular BioSystems

Slow protein evolutionary rates are dictated by surface-core association

(2011) A. Toth-Petroczy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UniProt Knowledgebase: a hub of integrated protein data

(2011) M. Magrane et al.   Database-The Journal of Biological Databases and Curation

Proteome-wide evidence for enhanced positive Darwinian selection within intrinsically disordered regions in proteins

(2011) Johan Nilsson et al.   GENOME BIOLOGY

Engineering recombinant poxviruses using a compact GFP–blasticidin resistance fusion gene for selection

(2010) Yik Chun Wong et al.   JOURNAL OF VIROLOGICAL METHODS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

How viruses hijack cell regulation

(2010) Norman E. Davey et al.   TRENDS IN BIOCHEMICAL SCIENCES

A 3′ terminal stem–loop structure in Nodamura virus RNA2 forms an essential cis-acting signal for RNA replication

(2010) John J. Rosskopf et al.   VIRUS RESEARCH

Structure of the RNA-Binding Domain of Nodamura Virus Protein B2, a Suppressor of RNA Interference†,‡

(2009) Stephanie Körber et al.   BIOCHEMISTRY

Close encounters of the third kind: disordered domains and the interactions of proteins

(2009) Peter Tompa et al.   BIOESSAYS

Disordered Tails of Homeodomains Facilitate DNA Recognition by Providing a Trade-Off between Folding and Specific Binding

(2009) Ágnes Tóth-Petróczy et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Dual Roles for an Arginine-Rich Motif in Specific Genome Recognition and Localization of Viral Coat Protein to RNA Replication Sites in Flock House Virus-Infected Cells

(2009) P. A. Venter et al.   JOURNAL OF VIROLOGY

Overlapping Genes Produce Proteins with Unusual Sequence Properties and Offer Insight into De Novo Protein Creation

(2009) C. Rancurel et al.   JOURNAL OF VIROLOGY

The nanny model for IDPs

(2009) Peter Tsvetkov et al.   Nature Chemical Biology

uShuffle: A useful tool for shuffling biological sequences while preserving the k-let counts

(2008) Minghui Jiang et al.   BMC BIOINFORMATICS

Function and structure of inherently disordered proteins

(2008) A Keith Dunker et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Occurrence, function and evolutionary origins of '2A-like' sequences in virus genomes

(2008) G. A. Luke et al.   JOURNAL OF GENERAL VIROLOGY

A comparative analysis of viral matrix proteins using disorder predictors

(2008) Gerard Goh et al.   Virology Journal