Using a transcriptomic approach to understand poor growth performance in farmed orange-spotted grouper (Epinephelus coioides) larvae: a case study in a commercial hatchery

Effect of dietary phenylalanine on growth performance and intestinal health of triploid rainbow trout (Oncorhynchus mykiss) in low fishmeal diets

(2023) Shuze Zhang et al.   Frontiers in Nutrition

Toward Systematic Breeding of Asian Sea Bass, Lates calcarifer (Bloch, 1790), in Malaysia: Status, Challenges and Prospects for Future Development

(2022) SHAHARAH MOHD IDRIS et al.   Asian Fisheries Science

Enhanced larval survival in orange‐spotted grouper ( Epinephelus coioides ) using optimized feeding regime

(2022) Ritesh Ranjan et al.   AQUACULTURE RESEARCH

Analysis of transcriptome difference between rapid-growing and slow-growing in Penaeus vannamei

(2021) Yong-yu Huang et al.   GENE

Development and testing of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata)

(2021) C. Peñaloza et al.   GENOMICS

Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides)

(2020) Xi Wu et al.   BMC GENOMICS

Identification of Candidate Growth-Related SNPs and Genes Using GWAS in Brown-Marbled Grouper (Epinephelus fuscoguttatus)

(2020) Yang Yang et al.   MARINE BIOTECHNOLOGY

Hybrid grouper in Vietnamese aquaculture: Production approaches and profitability of a promising new crop

(2020) Lachlan Peter Dennis et al.   AQUACULTURE

Screening and characterization of sex-specific markers developed by a simple NGS method in mandarin fish (Siniperca chuatsi)

(2020) Chong Han et al.   AQUACULTURE

Transcriptome analysis of grass carp (Ctenopharyngodon idella) between fast- and slow-growing fish

(2020) Xue Lu et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Dietary vitamin A deficiency reduces growth performance, immune function of intestine, and alters tight junction proteins of intestine for juvenile hybrid grouper (Epinephelus fuscoguttatus ♀ × Epinephelus lanceolatus ♂)

(2020) Dazhi Liang et al.   FISH & SHELLFISH IMMUNOLOGY

Analyses of diet preference of larval orange-spotted grouper (Epinephelus coioides) grown under inorganic fertilization method using next-generation sequencing

(2020) Jimmy Kuo et al.   AQUACULTURE

Status, challenges and trends of aquaculture in Singapore

(2020) Yubang Shen et al.   AQUACULTURE

Assessing Genetic Diversity for a Pre-Breeding Program in Piaractus mesopotamicus by SNPs and SSRs

(2019) Vito Antonio Mastrochirico-Filho et al.   Genes

An 8-Year Breeding Program for Asian Seabass Lates calcarifer: Genetic Evaluation, Experiences, and Challenges

(2018) Pham Van Khang et al.   Frontiers in Genetics

Transcriptomics analysis reveals candidate genes and pathways for susceptibility or resistance to Singapore grouper iridovirus in orange-spotted grouper (Epinephelus coioides)

(2018) Min Yang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Liver transcriptome analysis and de novo annotation of the orange-spotted groupers (Epinephelus coioides) under cold stress

(2018) Zhenzhu Sun et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Gill transcriptomes reveal involvement of cytoskeleton remodeling and immune defense in ammonia stress response in the banana shrimp Fenneropenaeus merguiensis

(2017) Wei Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome assembly and identification of genes and SNPs associated with growth traits in largemouth bass (Micropterus salmoides)

(2017) Shengjie Li et al.   GENETICA

Gene expression of bone morphogenetic proteins and jaw malformation in golden pompano Trachinotus ovatus larvae in different feeding regimes

(2017) Zhenhua Ma et al.   JOURNAL OF APPLIED ANIMAL RESEARCH

Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii)

(2016) Ido Bar et al.   BMC GENOMICS

Enhanced diagnostic yield in Meckel-Gruber and Joubert syndrome through exome sequencing supplemented with split-read mapping

(2016) Christopher M. Watson et al.   BMC Medical Genetics

Effects of prey color, wall color and water color on food ingestion of larval orange-spotted grouper Epinephelus coioides (Hamilton, 1822)

(2015) Jiasong Zhang et al.   AQUACULTURE INTERNATIONAL

Effects of dietary glutamate supplementation on growth performance, digestive enzyme activities and antioxidant capacity in intestine of grass carp (Ctenopharyngodon idella )

(2015) Y. Zhao et al.   AQUACULTURE NUTRITION

Rapid detection of SNPs in candidate genes regulating the growth of orange-spotted grouper, Epinephelus coioides (Hamilton, 1822), using semiconductor sequencing

(2015) Liang Guo et al.   AQUACULTURE RESEARCH

The genetic architecture of growth and fillet traits in farmed Atlantic salmon (Salmo salar)

(2015) Hsin Yuan Tsai et al.   BMC GENETICS

Recent insights into the biological functions of liver fatty acid binding protein 1

(2015) GuQi Wang et al.   JOURNAL OF LIPID RESEARCH

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Microbial communities associated with early stages of intensively reared orange-spotted grouper (Epinephelus coioides)

(2013) Yun-Zhang Sun et al.   AQUACULTURE RESEARCH

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

A preliminary study of digestive enzyme activities and amino acid composition of early juvenile yellowfin tuna (Thunnus albacares)

(2011) J. Alejandro Buentello et al.   AQUACULTURE

Computational methods for transcriptome annotation and quantification using RNA-seq

(2011) Manuel Garber et al.   NATURE METHODS

Molecular studies, disease status and prophylactic measures in grouper aquaculture: Economic importance, diseases and immunology

(2010) Ramasamy Harikrishnan et al.   AQUACULTURE

The first family-based breeding program in aquaculture

(2010) Trygve Gjedrem   Reviews in Aquaculture

Applications of New Sequencing Technologies for Transcriptome Analysis

(2009) Olena Morozova et al.   Annual Review of Genomics and Human Genetics

Skeletal anomalies in dusky grouper Epinephelus marginatus (Lowe 1834) juveniles reared with different methodologies and larval densities

(2009) Clara Boglione et al.   AQUACULTURE

The genetics of inbreeding depression

(2009) Deborah Charlesworth et al.   NATURE REVIEWS GENETICS

The complete mitochondrial genome of red grouper Plectropomus leopardus and its applications in identification of grouper species

(2008) Ze Yuan Zhu et al.   AQUACULTURE