R-loop induced stress response by second (p)ppGpp synthetase inMycobacterium smegmatis: functional and domain interdependence

ppGpp couples transcription to DNA repair in E. coli

(2016) V. Kamarthapu et al.   SCIENCE

Differential binding of ppGpp and pppGpp toE. coliRNA polymerase: photo-labeling and mass spectral studies

(2015) Kirtimaan Syal et al.   GENES TO CELLS

Biochemical Characterization of Mycobacterium smegmatis RnhC (MSMEG_4305), a Bifunctional Enzyme Composed of Autonomous N-Terminal Type I RNase H and C-Terminal Acid Phosphatase Domains

(2015) Agata Jacewicz et al.   JOURNAL OF BACTERIOLOGY

Thermodynamics of sodium dodecyl sulphate (SDS) micellization in the presence of some biologically relevant pH buffers

(2015) Joanna Makowska et al.   JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY

The core spliceosome as target and effector of non-canonical ATM signalling

(2015) Maria Tresini et al.   NATURE

R loops: new modulators of genome dynamics and function

(2015) José M. Santos-Pereira et al.   NATURE REVIEWS GENETICS

Recent functional insights into the role of (p)ppGpp in bacterial physiology

(2015) Vasili Hauryliuk et al.   NATURE REVIEWS MICROBIOLOGY

RNase HI Is Essential for Survival of Mycobacterium smegmatis

(2015) Alina E. Minias et al.   PLoS One

The Deletion of rnhB in Mycobacterium smegmatis Does Not Affect the Level of RNase HII Substrates or Influence Genome Stability

(2015) Alina E. Minias et al.   PLoS One

A double-edged sword: R loops as threats to genome integrity and powerful regulators of gene expression

(2014) K. Skourti-Stathaki et al.   GENES & DEVELOPMENT

Essential Roles for Mycobacterium tuberculosis Rel beyond the Production of (p)ppGpp

(2013) L. A. Weiss et al.   JOURNAL OF BACTERIOLOGY

The Magic Spot: A ppGpp Binding Site on E. coli RNA Polymerase Responsible for Regulation of Transcription Initiation

(2013) Wilma Ross et al.   MOLECULAR CELL

The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their Complex

(2013) Yuhong Zuo et al.   MOLECULAR CELL

Co-evolution of specific amino acid in sigma 1.2 region and nucleotide base in the discriminator to act as sensors of small molecule effectors of transcription initiation in mycobacteria

(2013) Priyanka Tare et al.   MOLECULAR MICROBIOLOGY

RNase H2 roles in genome integrity revealed by unlinking its activities

(2013) Hyongi Chon et al.   NUCLEIC ACIDS RESEARCH

Senataxin Associates with Replication Forks to Protect Fork Integrity across RNA-Polymerase-II-Transcribed Genes

(2012) Amaya Alzu et al.   CELL

R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants

(2012) P. C. Stirling et al.   GENES & DEVELOPMENT

MS_RHII-RSD, a Dual-Function RNase HII-(p)ppGpp Synthetase from Mycobacterium smegmatis

(2012) M. S. Murdeshwar et al.   JOURNAL OF BACTERIOLOGY

Effect of Surfactant Hydrophobicity on the Pathway for Unfolding of Ubiquitin

(2012) Bryan F. Shaw et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

R Loops: From Transcription Byproducts to Threats to Genome Stability

(2012) Andrés Aguilera et al.   MOLECULAR CELL

Linking RNA Polymerase Backtracking to Genome Instability in E. coli

(2011) Dipak Dutta et al.   CELL

R-loop-mediated genomic instability is caused by impairment of replication fork progression

(2011) W. Gan et al.   GENES & DEVELOPMENT

Co-directional replication–transcription conflicts lead to replication restart

(2011) Houra Merrikh et al.   NATURE

The RelA/SpoT Homolog (RSH) Superfamily: Distribution and Functional Evolution of ppGpp Synthetases and Hydrolases across the Tree of Life

(2011) Gemma C. Atkinson et al.   PLoS One

Structural and Functional Characterization of an RNase HI Domain from the Bifunctional Protein Rv2228c from Mycobacterium tuberculosis

(2010) H. A. Watkins et al.   JOURNAL OF BACTERIOLOGY

A metazoan ortholog of SpoT hydrolyzes ppGpp and functions in starvation responses

(2010) Dawei Sun et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Ribonuclease H: the enzymes in eukaryotes

(2009) Susana M. Cerritelli et al.   FEBS Journal

Ribonuclease H: molecular diversities, substrate binding domains, and catalytic mechanism of the prokaryotic enzymes

(2009) Takashi Tadokoro et al.   FEBS Journal

The Significance of EXDD and RXKD Motif Conservation in Rel Proteins

(2009) Mathew Sajish et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Destructive and protective action of sodium dodecyl sulphate micelles on the native conformation of Bovine Serum Albumin: A study by extrinsic fluorescence probe 1-hydroxy-2-naphthaldehyde

(2008) Rupashree Balia Singh et al.   CHEMICAL PHYSICS LETTERS

Control of bacterial transcription, translation and replication by (p)ppGpp

(2008) Anjana Srivatsan et al.   CURRENT OPINION IN MICROBIOLOGY

DNA Double-Strand Break Formation upon UV-Induced Replication Stress Activates ATM and DNA-PKcs Kinases

(2008) Hirohiko Yajima et al.   JOURNAL OF MOLECULAR BIOLOGY

Effect of sodium dodecyl sulfate on folding and thermal stability of acid-denatured cytochrome c: A spectroscopic approach

(2004) Qi Xu et al.   PROTEIN SCIENCE