Implementation of different relationship estimate methodologies in breeding value prediction in kiwiberry (Actinidia arguta)

First Chromosome-Scale Assembly and Deep Floral-Bud Transcriptome of a Male Kiwifruit

(2022) Jibran Tahir et al.   Frontiers in Genetics

Twelve years of SAMtools and BCFtools

(2021) Petr Danecek et al.   GigaScience

Use ggbreak to Effectively Utilize Plotting Space to Deal With Large Datasets and Outliers

(2021) Shuangbin Xu et al.   Frontiers in Genetics

Varietal variation and chromosome behaviour during meiosis in Solanum tuberosum

(2020) Anushree Choudhary et al.   HEREDITY

Sequencing depth and genotype quality: accuracy and breeding operation considerations for genomic selection applications in autopolyploid crops

(2020) Dorcus C. Gemenet et al.   THEORETICAL AND APPLIED GENETICS

QTL Mapping for Resistance to Cankers Induced by Pseudomonas syringae pv. actinidiae (Psa) in a Tetraploid Actinidia chinensis Kiwifruit Population

(2020) Jibran Tahir et al.   Pathogens

Genomic Prediction of Autotetraploids; Influence of Relationship Matrices, Allele Dosage, and Continuous Genotyping Calls in Phenotype Prediction

(2019) Ivone de Bem Oliveira et al.   G3-Genes Genomes Genetics

On the accuracy of genomic prediction models considering multi-trait and allele dosage in Urochloa spp. interspecific tetraploid hybrids

(2019) Filipe Inácio Matias et al.   MOLECULAR BREEDING

Genomic predictions in diploid Actinidia chinensis (kiwifruit)

(2019) C.-H. Cheng et al.   EUROPEAN JOURNAL OF HORTICULTURAL SCIENCE

Genetic Variance Partitioning and Genome-Wide Prediction with Allele Dosage Information in Autotetraploid Potato

(2018) Jeffrey B. Endelman et al.   GENETICS

Tools for Genetic Studies in Experimental Populations of Polyploids

(2018) Peter M. Bourke et al.   Frontiers in Plant Science

Genetic Variance Partitioning and Genome-Wide Prediction with Allele Dosage Information in Autotetraploid Potato

(2018) Jeffrey B. Endelman et al.   GENETICS

Automated tetraploid genotype calling by hierarchical clustering

(2017) Cari A. Schmitz Carley et al.   THEORETICAL AND APPLIED GENETICS

Advantages of continuous genotype values over genotype classes for GWAS in higher polyploids: a comparative study in hexaploid chrysanthemum

(2016) Fabian Grandke et al.   BMC GENOMICS

AGHmatrix: R Package to Construct Relationship Matrices for Autotetraploid and Diploid Species: A Blueberry Example

(2016) Rodrigo R. Amadeu et al.   Plant Genome

Polyploidy and genome evolution in plants

(2015) Pamela S Soltis et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

The Double-Reduction Landscape in Tetraploid Potato as Revealed by a High-Density Linkage Map

(2015) P. M. Bourke et al.   GENETICS

Estimating genomic heritabilities at the level of family-pool samples of perennial ryegrass using genotyping-by-sequencing

(2015) Bilal Hassan Ashraf et al.   THEORETICAL AND APPLIED GENETICS

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Meiotic chromosome pairing behaviour of natural tetraploids and induced autotetraploids of Actinidia chinensis

(2013) Jin-Hu Wu et al.   THEORETICAL AND APPLIED GENETICS

Meiotic chromosome pairing in Actinidia chinensis var. deliciosa

(2012) D. Mertten et al.   GENETICA

Whole-Genome Regression and Prediction Methods Applied to Plant and Animal Breeding

(2012) G. de los Campos et al.   GENETICS

Use of the numerator relationship matrix in genetic analysis of autopolyploid species

(2012) Richard J. Kerr et al.   THEORETICAL AND APPLIED GENETICS

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Genomic breeding value prediction: methods and procedures

(2009) M. P. L. Calus   Animal

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE