Gene conversion and linkage: effects on genome evolution and speciation

Whole-Genome Analysis of Individual Meiotic Events in Drosophila melanogaster Reveals That Noncrossover Gene Conversions Are Insensitive to Interference and the Centromere Effect

(2016) Danny E. Miller et al.   GENETICS

Indels, structural variation, and recombination drive genomic diversity inPlasmodium falciparum

(2016) Alistair Miles et al.   GENOME RESEARCH

Whole-Genome Analysis of Individual Meiotic Events in Drosophila melanogaster Reveals That Noncrossover Gene Conversions Are Insensitive to Interference and the Centromere Effect

(2016) Danny E. Miller et al.   GENETICS

Genome-wide tests for introgression between cactophilicDrosophilaimplicate a role of inversions during speciation

(2015) Konrad Lohse et al.   EVOLUTION

The Impact of Recombination Hotspots on Genome Evolution of a Fungal Plant Pathogen

(2015) D. Croll et al.   GENETICS

Quantification of GC-biased gene conversion in the human genome

(2015) Sylvain Glémin et al.   GENOME RESEARCH

Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum ofFicedulaflycatchers

(2015) Reto Burri et al.   GENOME RESEARCH

Chromosome inversions, adaptive cassettes and the evolution of species' ranges

(2015) Mark Kirkpatrick et al.   MOLECULAR ECOLOGY

Non-allelic gene conversion enables rapid evolutionary change at multiple regulatory sites encoded by transposable elements

(2015) Christopher E Ellison et al.   eLife

Non-crossover gene conversions show strong GC bias and unexpected clustering in humans

(2015) Amy L Williams et al.   eLife

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

Detection of genomic variations and DNA polymorphisms and impact on analysis of meiotic recombination and genetic mapping

(2014) Ji Qi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Patterns of genetic variation across inversions: geographic variation in the In(2L)t inversion in populations of Drosophila melanogaster from eastern Australia

(2013) W Kennington et al.   BMC EVOLUTIONARY BIOLOGY

CHROMOSOMAL REARRANGEMENTS AND THE GENETICS OF REPRODUCTIVE BARRIERS INMIMULUS(MONKEY FLOWERS)

(2013) Lila Fishman et al.   EVOLUTION

GC-Biased Gene Conversion in Yeast Is Specifically Associated with Crossovers: Molecular Mechanisms and Evolutionary Significance

(2013) Yann Lesecque et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population Genomic Analysis Reveals No Evidence for GC-Biased Gene Conversion in Drosophila melanogaster

(2013) Matthew C. Robinson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

(2013) Jean-François Flot et al.   NATURE

Molecular Population Genetics of Inversion Breakpoint Regions in Drosophila pseudoobscura

(2013) Andre G. Wallace et al.   G3-Genes Genomes Genetics

Hard Selective Sweep and Ectopic Gene Conversion in a Gene Cluster Affording Environmental Adaptation

(2013) Marc Hanikenne et al.   PLoS Genetics

The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana

(2013) Erik Wijnker et al.   eLife

Great majority of recombination events in Arabidopsis are gene conversion events

(2012) S. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Whole-Chromosome Analysis of Meiotic Recombination in Drosophila melanogaster

(2012) Danny E. Miller et al.   G3-Genes Genomes Genetics

Recombination Modulates How Selection Affects Linked Sites in Drosophila

(2012) Suzanne E. McGaugh et al.   PLOS BIOLOGY

Deep Genome-Wide Measurement of Meiotic Gene Conversion Using Tetrad Analysis in Arabidopsis thaliana

(2012) Yujin Sun et al.   PLoS Genetics

Population Genomics of Inversion Polymorphisms in Drosophila melanogaster

(2012) Russell B. Corbett-Detig et al.   PLoS Genetics

Effects of Inversions on Within- and Between-Species Recombination and Divergence

(2011) Laurie S. Stevison et al.   Genome Biology and Evolution

Studies of the species barrier between Drosophila subobscura and D. madeirensis V: the importance of sex-linked inversion in preserving species identity

(2011) M. KHADEM et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The landscape of recombination in African Americans

(2011) Anjali G. Hinch et al.   NATURE

Coalescent patterns for chromosomal inversions in divergent populations

(2011) R. F. Guerrero et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic impacts of chromosomal inversions in parapatric Drosophila species

(2011) S. E. McGaugh et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Gene Conversion in Angiosperm Genomes with an Emphasis on Genes Duplicated by Polyploidization

(2011) Xi-Yin Wang et al.   Genes

Genetic Interference: Dont Stand So Close to Me

(2010) Luke Berchowitz et al.   CURRENT GENOMICS

Nonallelic Gene Conversion in the Genus Drosophila

(2010) C. Casola et al.   GENETICS

An Effective Method for Detecting Gene Conversion Events in Whole Genomes

(2010) Chih-Hao Hsu et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Recombination and selection in the maintenance of the adaptive value of inversions

(2010) C. PEGUEROLES et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Centromeres Convert but Don't Cross

(2010) Paul B. Talbert et al.   PLOS BIOLOGY

Widespread Gene Conversion in Centromere Cores

(2010) Jinghua Shi et al.   PLOS BIOLOGY

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

CHROMOSOMAL INVERSIONS AND SPECIES DIFFERENCES: WHEN ARE GENES AFFECTING ADAPTIVE DIVERGENCE AND REPRODUCTIVE ISOLATION EXPECTED TO RESIDE WITHIN INVERSIONS?

(2009) Jeffrey L. Feder et al.   EVOLUTION

Identification of EMS-Induced Mutations in Drosophila melanogaster by Whole-Genome Sequencing

(2009) J. P. Blumenstiel et al.   GENETICS

Comparative inference of illegitimate recombination between rice and sorghum duplicated genes produced by polyploidization

(2009) X. Wang et al.   GENOME RESEARCH

Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

(2008) Ary A. Hoffmann et al.   Annual Review of Ecology Evolution and Systematics

Gene conversion in the rice genome

(2008) Shuqing Xu et al.   BMC GENOMICS

TOWARD A SELECTION THEORY OF MOLECULAR EVOLUTION

(2008) Matthew W. Hahn   EVOLUTION

The Influence of Gene Conversion on Linkage Disequilibrium Around a Selective Sweep

(2008) D. A. Jones et al.   GENETICS

Retention of Induced Mutations in a Drosophila Reverse-Genetic Resource

(2008) J. L. Cooper et al.   GENETICS

Neofunctionalization of Duplicated Genes Under the Pressure of Gene Conversion

(2008) K. M. Teshima et al.   GENETICS

The Evolutionary Rate of Duplicated Genes Under Concerted Evolution

(2008) S. Mano et al.   GENETICS

Confounding between recombination and selection, and the Ped/Pop method for detecting selection

(2008) P. F. O'Reilly et al.   GENOME RESEARCH

Genetic Exchange versus Genetic Differentiation in a Medium-Sized Inversion of Drosophila: The A2/Ast Arrangements of Drosophila subobscura

(2008) C. Nobrega et al.   MOLECULAR BIOLOGY AND EVOLUTION

High-resolution mapping of meiotic crossovers and non-crossovers in yeast

(2008) Eugenio Mancera et al.   NATURE

Hierarchy of nonhomologous end-joining, single-strand annealing and gene conversion at site-directed DNA double-strand breaks

(2008) W. Y. Mansour et al.   NUCLEIC ACIDS RESEARCH