Two adjacent inversions maintain genomic differentiation between migratory and stationary ecotypes of Atlantic cod

Rhodopsin Gene Polymorphism Associated with Divergent Light Environments in Atlantic Cod

(2015) Christophe Pampoulie et al.   BEHAVIOR GENETICS

Spawning segregation and philopatry are major prezygotic barriers in sympatric cryptic Mugil cephalus species

(2015) Kang-Ning Shen et al.   COMPTES RENDUS BIOLOGIES

Adaptive divergence in the monkey flower Mimulus guttatus is maintained by a chromosomal inversion

(2015) Alex D. Twyford et al.   EVOLUTION

Genes located in a chromosomal inversion are correlated with territorial song in white-throated sparrows

(2015) W. M. Zinzow-Kramer et al.   GENES BRAIN AND BEHAVIOR

Functional Dissociation of Group III Metabotropic Glutamate Receptors Revealed by Direct Comparison between the Behavioral Profiles of Knockout Mouse Lines

(2015) Hannelore Goddyn et al.   INTERNATIONAL JOURNAL OF NEUROPSYCHOPHARMACOLOGY

Evolution of codfishes (Teleostei: Gadinae) in geographical and ecological space: evidence that physiological limits drove diversification of subarctic fishes

(2015) Hannah L. Owens   JOURNAL OF BIOGEOGRAPHY

Evolutionary history and adaptive significance of the polymorphic Pan I in migratory and stationary populations of Atlantic cod (Gadus morhua)

(2015) Øivind Andersen et al.   Marine Genomics

Chromosomal diversity in tropical reef fishes is related to body size and depth range

(2015) P.A. Martinez et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A genetic mechanism for female-limited Batesian mimicry in Papilio butterfly

(2015) Hideki Nishikawa et al.   NATURE GENETICS

Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)

(2015) Sangeet Lamichhaney et al.   NATURE GENETICS

A supergene determines highly divergent male reproductive morphs in the ruff

(2015) Clemens Küpper et al.   NATURE GENETICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Supergenes and their role in evolution

(2014) M J Thompson et al.   HEREDITY

Linking tagging technology and molecular genetics to gain insight in the spatial dynamics of two stocks of cod in Northeast Atlantic waters

(2014) K. Michalsen et al.   ICES JOURNAL OF MARINE SCIENCE

A review of early life history dynamics of Barents Sea cod (Gadus morhua)

(2014) G. Ottersen et al.   ICES JOURNAL OF MARINE SCIENCE

Leiomodin 3 and tropomodulin 4 have overlapping functions during skeletal myofibrillogenesis

(2014) C. U. Nworu et al.   JOURNAL OF CELL SCIENCE

Leiomodin-3 dysfunction results in thin filament disorganization and nemaline myopathy

(2014) Michaela Yuen et al.   JOURNAL OF CLINICAL INVESTIGATION

Transcript levels of class I GLUTs within individual tissues and the direct relationship between GLUT1 expression and glucose metabolism in Atlantic cod (Gadus morhua)

(2014) Jennifer R. Hall et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY

Mitogenome sequence variation in migratory and stationary ecotypes of North-east Atlantic cod

(2014) Bård O. Karlsen et al.   Marine Genomics

Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout

(2014) D. E. Pearse et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic islands of divergence and their consequences for the resolution of spatial structure in an exploited marine fish

(2013) Ian R. Bradbury et al.   Evolutionary Applications

Genetic analysis of vibriosis and viral nervous necrosis resistance in Atlantic cod (Gadus morhua L.) using a cure model1

(2013) R. Bangera et al.   JOURNAL OF ANIMAL SCIENCE

A genomic island linked to ecotype divergence in Atlantic cod

(2013) Jakob Hemmer-Hansen et al.   MOLECULAR ECOLOGY

Genomic divergence between the migratory and stationary ecotypes of Atlantic cod

(2013) Bård O. Karlsen et al.   MOLECULAR ECOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Crystal structure of the secretory isozyme of mammalian carbonic anhydrases CA VI: Implications for biological assembly and inhibitor development

(2012) Ewa S. Pilka et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Sex dimorphic expression of five dmrt genes identified in the Atlantic cod genome. The fish-specific dmrt2b diverged from dmrt2a before the fish whole-genome duplication

(2012) Hanne Johnsen et al.   GENE

Phylogeny and expression divergence of metabotropic glutamate receptor genes in the brain of zebrafish (Danio rerio)

(2012) Marion F. Haug et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Egg buoyancy variability in local populations of Atlantic cod (Gadus morhua)

(2012) Kyung-Mi Jung et al.   MARINE BIOLOGY

Settling-depth vs. genotype and size vs. genotype correlations at the Pan I locus in 0-group Atlantic cod Gadus morhua 

(2012) SE Fevolden et al.   MARINE ECOLOGY PROGRESS SERIES

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Prezygotic Barriers to Hybridization in Marine Broadcast Spawners: Reproductive Timing and Mating System Variation

(2012) Carla A. Monteiro et al.   PLoS One

Cerebellar oligodendroglial cells have a mesencephalic origin

(2011) Nora Mecklenburg et al.   GLIA

Population connectivity among migratory and stationary cod Gadus morhua in the Northeast Atlantic—A review of 80 years of study

(2011) JT Nordeide et al.   MARINE ECOLOGY PROGRESS SERIES

Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry

(2011) Mathieu Joron et al.   NATURE

The genome sequence of Atlantic cod reveals a unique immune system

(2011) Bastiaan Star et al.   NATURE

Evidence of Segregated Spawning in a Single Marine Fish Stock: Sympatric Divergence of Ecotypes in Icelandic Cod?

(2011) Timothy B. Grabowski et al.   PLoS One

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Chromosome-wide linkage disequilibrium caused by an inversion polymorphism in the white-throated sparrow (Zonotrichia albicollis)

(2010) L Y Huynh et al.   HEREDITY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature

(2010) I. R. Bradbury et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua)

(2009) Einar E Nielsen et al.   BMC EVOLUTIONARY BIOLOGY

GENETIC DIVERSITY IN SPAWNING COD ALONG THE NORWEGIAN COAST

(2009) DAG MØLLER   HEREDITAS

Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

(2008) Ary A. Hoffmann et al.   Annual Review of Ecology Evolution and Systematics

Paradigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts

(2008) Lorenz Hauser et al.   FISH AND FISHERIES

The Chromosomal Polymorphism Linked to Variation in Social Behavior in the White-Throated Sparrow (Zonotrichia albicollis) Is a Complex Rearrangement and Suppressor of Recombination

(2008) J. W. Thomas et al.   GENETICS

Spatial shifts in spawning habitats of Arcto-Norwegian cod related to multidecadal climate oscillations and climate change

(2008) S. Sundby et al.   ICES JOURNAL OF MARINE SCIENCE

Ice-age survival of Atlantic cod: agreement between palaeoecology models and genetics

(2007) G. R Bigg et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES