Transcriptome modulation during host shift is driven by secondary metabolites in desertDrosophila

Differences in performance and transcriptome-wide gene expression associated withRhagoletis(Diptera: Tephritidae) larvae feeding in alternate host fruit environments

(2015) Gregory J. Ragland et al.   MOLECULAR ECOLOGY

Transcriptional variation associated with cactus host plant adaptation inDrosophila mettleripopulations

(2015) Kim Hoang et al.   MOLECULAR ECOLOGY

Evolution of herbivory in Drosophilidae linked to loss of behaviors, antennal responses, odorant receptors, and ancestral diet

(2015) Benjamin Goldman-Huertas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomics of Ecological Adaptation in Cactophilic Drosophila

(2015) Yolanda Guillén et al.   Genome Biology and Evolution

Climate change, adaptation, and phenotypic plasticity: the problem and the evidence

(2014) Juha Merilä et al.   Evolutionary Applications

Nutritional Composition ofOpuntia sulphureaG. Don Cladodes

(2014) Valeria P. Carreira et al.   HASELTONIA

Host alkaloids differentially affect developmental stability and wing vein canalization in cactophilicDrosophila buzzatii

(2014) J. Padró et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Deciphering life history transcriptomes in different environments

(2014) William J. Etges et al.   MOLECULAR ECOLOGY

Differences in Tolerance to Host Cactus Alkaloids in Drosophila koepferae and D. buzzatii

(2014) Ignacio M. Soto et al.   PLoS One

An alkaloid fraction extracted from the cactusTrichocereus terscheckiiaffects fitness in the cactophilic flyDrosophila buzzatii(Diptera: Drosophilidae)

(2013) Cristian Corio et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

TRANSCRIPTOME-WIDE EXPRESSION VARIATION ASSOCIATED WITH ENVIRONMENTAL PLASTICITY AND MATING SUCCESS IN CACTOPHILICDROSOPHILA MOJAVENSIS

(2013) Gilbert Smith et al.   EVOLUTION

Mechanisms of macroevolution: polyphagous plasticity in butterfly larvae revealed by RNA-Seq

(2013) Maria de la Paz Celorio-Mancera et al.   MOLECULAR ECOLOGY

Nutrigenomics in Arma chinensis: Transcriptome Analysis of Arma chinensis Fed on Artificial Diet and Chinese Oak Silk Moth Antheraea pernyi Pupae

(2013) Deyu Zou et al.   PLoS One

Ecdysone Control of Developmental Transitions: Lessons from Drosophila Research

(2012) Naoki Yamanaka et al.   Annual Review of Entomology

Bleach gel: A simple agarose gel for analyzing RNA quality

(2012) Patrick S. Aranda et al.   ELECTROPHORESIS

Population transcriptomics of cactus host shifts inDrosophila mojavensis

(2012) LUCIANO M. MATZKIN   MOLECULAR ECOLOGY

Monophyly, divergence times, and evolution of host plant use inferred from a revised phylogeny of the Drosophila repleta species group

(2012) Deodoro C.S.G. Oliveira et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

An insect-specific P450 oxidative decarbonylase for cuticular hydrocarbon biosynthesis

(2012) Y. Qiu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Specialist versus generalist insect herbivores and plant defense

(2012) Jared G. Ali et al.   TRENDS IN PLANT SCIENCE

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Oviposition and performance in natural hosts in cactophilic Drosophila

(2011) Eduardo M. Soto et al.   EVOLUTIONARY ECOLOGY

Ubiquitin–proteasome pathway and cellular responses to oxidative stress

(2011) Fu Shang et al.   FREE RADICAL BIOLOGY AND MEDICINE

Differential expression in RNA-seq: A matter of depth

(2011) S. Tarazona et al.   GENOME RESEARCH

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

The significance of genome-wide transcriptional regulation in the evolution of stress tolerance

(2010) Dick Roelofs et al.   EVOLUTIONARY ECOLOGY

New mescaline concentrations from 14 taxa/cultivars of Echinopsis spp. (Cactaceae) (“San Pedro”) and their relevance to shamanic practice

(2010) Olabode Ogunbodede et al.   JOURNAL OF ETHNOPHARMACOLOGY

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

(2010) et al.   SCIENCE

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

The impact of genomic neighborhood on the evolution of human and chimpanzee transcriptome

(2009) S. De et al.   GENOME RESEARCH

Principles of ubiquitin and SUMO modifications in DNA repair

(2009) Steven Bergink et al.   NATURE

Reproductive ecology ofDrosophila

(2008) T. A. Markow et al.   FUNCTIONAL ECOLOGY

The Molecular Basis of Host Adaptation in Cactophilic Drosophila: Molecular Evolution of a Glutathione S-Transferase Gene (GstD1) in Drosophila mojavensis

(2008) L. M. Matzkin   GENETICS

Transcriptomic profiles ofDrosophila melanogasterthird instar larval midgut and responses to oxidative stress

(2008) H.-M. Li et al.   INSECT MOLECULAR BIOLOGY

Wing morphology and fluctuating asymmetry depend on the host plant in cactophilic Drosophila

(2008) I. M. SOTO et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

A novel cytochrome P450 gene (CYP4G25) of the silkmoth Antheraea yamamai: Cloning and expression pattern in pharate first instar larvae in relation to diapause

(2008) Ping Yang et al.   JOURNAL OF INSECT PHYSIOLOGY

Molecular evolution and population genetics of twoDrosophila mettlericytochrome P450 genes involved in host plant utilization

(2008) JEREMY M. BONO et al.   MOLECULAR ECOLOGY