Optimization of genotyping by sequencing (GBS) data in common bean (Phaseolus vulgaris L.)

The Effects of Restriction-Enzyme Choice on Properties of Genotyping-by-Sequencing Libraries: A Study in Cassava ()

(2014) Martha T. Hamblin et al.   CROP SCIENCE

Population genetics ofSetaria viridis, a new model system

(2014) Pu Huang et al.   MOLECULAR ECOLOGY

A reference genome for common bean and genome-wide analysis of dual domestications

(2014) Jeremy Schmutz et al.   NATURE GENETICS

Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

(2014) Samira Mafi Moghaddam et al.   Frontiers in Plant Science

The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences

(2013) Joanne Russell et al.   MOLECULAR BREEDING

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture

(2012) N. Rohland et al.   GENOME RESEARCH

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

High-throughput SNP discovery and assay development in common bean

(2010) David L Hyten et al.   BMC GENOMICS