Signatures of protein thermal denaturation and local hydrophobicity in domain specific hydration behavior: a comparative molecular dynamics study

Cold denaturation as a tool to measure protein stability

(2016) Domenico Sanfelice et al.   BIOPHYSICAL CHEMISTRY

Unusual dynamic properties of water near the ice-binding plane of hyperactive antifreeze protein

(2015) Anna Kuffel et al.   JOURNAL OF CHEMICAL PHYSICS

Effect of temperature on the low-frequency vibrational spectrum and relative structuring of hydration water around a single-stranded DNA

(2015) Kaushik Chakraborty et al.   JOURNAL OF CHEMICAL PHYSICS

A Molecular Interpretation of 2D IR Protein Folding Experiments with Markov State Models

(2014) Carlos R. Baiz et al.   BIOPHYSICAL JOURNAL

The non-uniform early structural response of globular proteins to cold denaturing conditions: A case study with Yfh1

(2014) Prathit Chatterjee et al.   JOURNAL OF CHEMICAL PHYSICS

Exploring the role of hydration and confinement in the aggregation of amyloidogenic peptides Aβ16−22 and Sup357−13 in AOT reverse micelles

(2014) Anna Victoria Martinez et al.   JOURNAL OF CHEMICAL PHYSICS

Water Tetrahedrons, Hydrogen-Bond Dynamics, and the Orientational Mobility of Water around Hydrophobic Solutes

(2014) N. Galamba   JOURNAL OF PHYSICAL CHEMISTRY B

Microscopic Hydration Properties of the Aβ1–42 Peptide Monomer and the Globular Protein Ubiquitin: A Comparative Molecular Dynamics Study

(2014) Jaya C. Jose et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Yeast Frataxin Is Stabilized by Low Salt Concentrations: Cold Denaturation Disentangles Ionic Strength Effects from Specific Interactions

(2014) Domenico Sanfelice et al.   PLoS One

Cooperative Cold Denaturation: The Case of the C-Terminal Domain of Ribosomal Protein L9

(2013) Bowu Luan et al.   BIOCHEMISTRY

Molecular dynamics simulation studies of the structural response of an isolated Aβ1–42 monomer localized in the vicinity of the hydrophilic TiO2 surface

(2013) Jaya C. Jose et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

Water’s Structure around Hydrophobic Solutes and the Iceberg Model

(2013) N. Galamba   JOURNAL OF PHYSICAL CHEMISTRY B

Single-Molecule Spectroscopy of Cold Denaturation and the Temperature-Induced Collapse of Unfolded Proteins

(2013) Mikayel Aznauryan et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Importance of Protein Conformational Motions and Electrostatic Anchoring Sites on the Dynamics and Hydrogen Bond Properties of Hydration Water

(2013) Somedatta Pal et al.   LANGMUIR

Effect of the A30P mutation on the structural dynamics of micelle-bound αSynuclein released in water: a molecular dynamics study

(2012) Prathit Chatterjee et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

The Role of Hydration in Protein Stability: Comparison of the Cold and Heat Unfolded States of Yfh1

(2012) Miquel Adrover et al.   JOURNAL OF MOLECULAR BIOLOGY

Role of Hydrophobic Hydration in Protein Stability: A 3D Water-Explicit Protein Model Exhibiting Cold and Heat Denaturation

(2012) Silvina Matysiak et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Frequency Distribution of the Amide-I Vibration Sorted by Residues in Amyloid Fibrils Revealed by 2D-IR Measurements and Simulations

(2012) Cyril Falvo et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Sitting at the Edge: How Biomolecules use Hydrophobicity to Tune Their Interactions and Function

(2012) Amish J. Patel et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Direct Characterization of Hydrophobic Hydration during Cold and Pressure Denaturation

(2012) Payel Das et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Water structural transformation at molecular hydrophobic interfaces

(2012) Joel G. Davis et al.   NATURE

Interplay between desolvation and secondary structure in mediating cosolvent and temperature induced alpha-synuclein aggregation

(2012) V L Anderson et al.   PHYSICAL BIOLOGY

Structure of an Intermediate State in Protein Folding and Aggregation

(2012) P. Neudecker et al.   SCIENCE

The Protein-Folding Problem, 50 Years On

(2012) K. A. Dill et al.   SCIENCE

Role of Water in Protein Aggregation and Amyloid Polymorphism

(2011) D. Thirumalai et al.   ACCOUNTS OF CHEMICAL RESEARCH

Forced Degradation of Therapeutic Proteins

(2011) Andrea Hawe et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

Highly Anomalous Energetics of Protein Cold Denaturation Linked to Folding-Unfolding Kinetics

(2011) M. Luisa Romero-Romero et al.   PLoS One

Side-chain hydrophobicity scale derived from transmembrane protein folding into lipid bilayers

(2011) C. P. Moon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protein and solute distribution in drug substance containers during frozen storage and post-thawing: A tool to understand and define freezing-thawing parameters in biotechnology process development

(2010) Parag Kolhe et al.   BIOTECHNOLOGY PROGRESS

Protein Heat Capacity: An Anomaly that Maybe Never Was

(2010) Alan Cooper   Journal of Physical Chemistry Letters

Understanding Cold Denaturation: The Case Study of Yfh1

(2010) Miquel Adrover et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Dynamics of a Myoglobin Mutant Enzyme: 2D IR Vibrational Echo Experiments and Simulations

(2010) Sayan Bagchi et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Molecular Simulation ofab InitioProtein Folding for a Millisecond Folder NTL9(1−39)

(2010) Vincent A. Voelz et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

On the molecular origin of cold denaturation of globular proteins

(2010) Giuseppe Graziano   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Theoretical analysis on thermal stability of a protein focused on the water entropy

(2009) Ken-ichi Amano et al.   CHEMICAL PHYSICS LETTERS

A theoretical analysis on characteristics of protein structures induced by cold denaturation

(2009) Hiraku Oshima et al.   JOURNAL OF CHEMICAL PHYSICS

High-Throughput Thermal Scanning: A General, Rapid Dye-Binding Thermal Shift Screen for Protein Engineering

(2009) Jason J. Lavinder et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Direct evidence for a dry molten globule intermediate during the unfolding of a small protein

(2009) S. K. Jha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hydration Dynamics in a Partially Denatured Ensemble of the Globular Protein Human α-Lactalbumin Investigated with Molecular Dynamics Simulations

(2008) Neelanjana Sengupta et al.   BIOPHYSICAL JOURNAL

On the cold denaturation of globular proteins

(2008) Eduardo Ascolese et al.   CHEMICAL PHYSICS LETTERS

Mechanistic Elements of Protein Cold Denaturation†

(2008) Carlos F. Lopez et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Thickness of the Hydration Layer of a Protein from Molecular Dynamics Simulation

(2008) Sudipta Kumar Sinha et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Key Role of Proximal Water in Regulating Thermostable Proteins

(2008) Fabio Sterpone et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Cold Denaturation of Yeast Frataxin Offers the Clue to Understand the Effect of Alcohols on Protein Stability

(2008) Stephen R. Martin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Protein Cold Denaturation as Seen From the Solvent

(2008) Monika Davidovic et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Microscopic Mechanism for Cold Denaturation

(2008) Cristiano L. Dias et al.   PHYSICAL REVIEW LETTERS

An experimental survey of the transition between two-state and downhill protein folding scenarios

(2008) F. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA