Accounting for Protein Subcellular Localization: A Compartmental Map of the Rat Liver Proteome

Cathepsin Protease Controls Copper and Cisplatin Accumulation via Cleavage of the Ctr1 Metal-binding Ectodomain

(2016) Helena Öhrvik et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dynamic internalization and recycling of a metal ion transporter: Cu homeostasis and CTR1, the human Cu+uptake system

(2016) Rebecca J. Clifford et al.   JOURNAL OF CELL SCIENCE

Analysis of protein-coding genetic variation in 60,706 humans

(2016) Monkol Lek et al.   NATURE

A draft map of the mouse pluripotent stem cell spatial proteome

(2016) Andy Christoforou et al.   Nature Communications

Global, quantitative and dynamic mapping of protein subcellular localization

(2016) Daniel N Itzhak et al.   eLife

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Reproducibility: Standardize antibodies used in research

(2015) Andrew Bradbury et al.   NATURE

MitoMiner v3.1, an update on the mitochondrial proteomics database

(2015) Anthony C. Smith et al.   NUCLEIC ACIDS RESEARCH

MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins

(2015) Sarah E. Calvo et al.   NUCLEIC ACIDS RESEARCH

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

mixtools: AnRPackage for Analyzing Finite Mixture Models

(2015) Tatiana Benaglia et al.   Journal of Statistical Software

Protein–protein interactions and genetic diseases: The interactome

(2014) Kasper Lage   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Adaptor protein complexes and intracellular transport

(2014) Sang Yoon Park et al.   BIOSCIENCE REPORTS

A Proteome-Scale Map of the Human Interactome Network

(2014) Thomas Rolland et al.   CELL

COMPARTMENTS: unification and visualization of protein subcellular localization evidence

(2014) J. X. Binder et al.   Database-The Journal of Biological Databases and Curation

The mammalian copper transporters CTR1 and CTR2 and their roles in development and disease

(2013) Natalie K.Y. Wee et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

The Proteome of Human Liver Peroxisomes: Identification of Five New Peroxisomal Constituents by a Label-Free Quantitative Proteomics Survey

(2013) Thomas Gronemeyer et al.   PLoS One

Advances in high-resolution imaging - techniques for three-dimensional imaging of cellular structures

(2012) D. S. Lidke et al.   JOURNAL OF CELL SCIENCE

Structure-based prediction of protein–protein interactions on a genome-wide scale

(2012) Qiangfeng Cliff Zhang et al.   NATURE

Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways

(2011) Michela Palmieri et al.   HUMAN MOLECULAR GENETICS

Classification of Subcellular Location by Comparative Proteomic Analysis of Native and Density-shifted Lysosomes

(2011) Maria Cecilia Della Valle et al.   MOLECULAR & CELLULAR PROTEOMICS

Deep sequencing reveals 50 novel genes for recessive cognitive disorders

(2011) Hossein Najmabadi et al.   NATURE

MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

(2011) Lily Ting et al.   NATURE METHODS

Loss of Niemann-Pick C1 or C2 Protein Results in Similar Biochemical Changes Suggesting That These Proteins Function in a Common Lysosomal Pathway

(2011) Sayali S. Dixit et al.   PLoS One

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Towards a knowledge-based Human Protein Atlas

(2010) Mathias Uhlen et al.   NATURE BIOTECHNOLOGY

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The proteome of lysosomes

(2010) Bernd A. Schröder et al.   PROTEOMICS

PeroxisomeDB 2.0: an integrative view of the global peroxisomal metabolome

(2009) Agatha Schlüter et al.   NUCLEIC ACIDS RESEARCH

A Gene Network Regulating Lysosomal Biogenesis and Function

(2009) Marco Sardiello et al.   SCIENCE

A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology

(2008) David J. Pagliarini et al.   CELL

The Mannose 6-Phosphate Glycoprotein Proteome

(2008) David E. Sleat et al.   JOURNAL OF PROTEOME RESEARCH