Integrating variation in bacterial‐fungal co‐occurrence network with soil carbon dynamics

Effects of Successive Planting of Eucalyptus Plantations on Tree Growth and Soil Quality

(2023) Qiongling Dai et al.   Sustainability

Fungal hyphae regulate bacterial diversity and plasmid-mediated functional novelty during range expansion

(2022) Chujin Ruan et al.   CURRENT BIOLOGY

Intraspecies heterogeneity in microbial interactions

(2021) Dallas L Mould et al.   CURRENT OPINION IN MICROBIOLOGY

Interkingdom plant-microbial ecological networks under selective and clear cutting of tropical rainforest

(2021) Jie Chen et al.   FOREST ECOLOGY AND MANAGEMENT

Soil nutrient supply and tree species drive changes in soil microbial communities during the transformation of a multi-generation Eucalyptus plantation

(2021) Yuxing Xu et al.   APPLIED SOIL ECOLOGY

The shifts in soil microbial community and association network induced by successive planting of Eucalyptus plantations

(2021) Yuxing Xu et al.   FOREST ECOLOGY AND MANAGEMENT

Soil multitrophic network complexity enhances the link between biodiversity and multifunctionality in agricultural systems

(2021) Shuo Jiao et al.   GLOBAL CHANGE BIOLOGY

A trait-based understanding of wood decomposition by fungi

(2020) Nicky Lustenhouwer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of the successive planting of Eucalyptus urophylla on the soil bacterial and fungal community structure, diversity, microbial biomass, and enzyme activity

(2019) Lingyue Zhu et al.   LAND DEGRADATION & DEVELOPMENT

Response and driving factors of soil microbial diversity related to global nitrogen addition

(2019) Yang Yang et al.   LAND DEGRADATION & DEVELOPMENT

Understanding how long-term organic amendments increase soil phosphatase activities: Insight into phoD- and phoC-harboring functional microbial populations

(2019) Gongwen Luo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

(2018) Paloma Durán et al.   CELL

Competitive network determines the direction of the diversity–function relationship

(2017) Daniel S. Maynard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

(2016) Bin Ma et al.   ISME Journal

Effects of short-rotationEucalyptusplantations on soil quality attributes in highly acidic soils of the central highlands of Ethiopia

(2016) D. Temesgen et al.   SOIL USE AND MANAGEMENT

The Ecology and Evolution of Microbial Competition

(2016) Melanie Ghoul et al.   TRENDS IN MICROBIOLOGY

Losses of soil carbon by converting tropical forest to plantations: erosion and decomposition estimated byδ13C

(2015) Thomas Guillaume et al.   GLOBAL CHANGE BIOLOGY

A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment

(2015) Marcel GA van der Heijden et al.   ISME Journal

The contentious nature of soil organic matter

(2015) Johannes Lehmann et al.   NATURE

Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

High-throughput Fluorometric Measurement of Potential Soil Extracellular Enzyme Activities

(2013) Colin W. Bell et al.   Jove-Journal of Visualized Experiments

Comparison of ITS1 and ITS2 rDNA in 454 sequencing of hyperdiverse fungal communities

(2012) Anna L. Bazzicalupo et al.   Fungal Ecology

Effects of deforestation on soil major macro-nutrient and other selected chemical properties of secondary tropical peat swamp forest

(2012) S. M. Ismawi   International Journal of Physical Sciences

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Inferring Correlation Networks from Genomic Survey Data

(2012) Jonathan Friedman et al.   PLoS Computational Biology

Metagenomic Analysis of a Southern Maritime Antarctic Soil

(2012) David A. Pearce et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

(2011) Charles K Lee et al.   ISME Journal

Phylogeny of Penicillium and the segregation of Trichocomaceae into three families

(2011) J. Houbraken et al.   STUDIES IN MYCOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Carbon-mineralization kinetics in an organically managed Cambic Arenosol amended with organic fertilizers

(2009) Henrique M. Ribeiro et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE