Candidatus Kirkpatrickella diaphorinae gen. nov., sp. nov., an uncultured endosymbiont identified in a population of Diaphorina citri from Hawaii

Search and sequence analysis tools services from EMBL-EBI in 2022

(2022) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

(2021) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Genome Features of Asaia sp. W12 Isolated from the Mosquito Anopheles stephensi Reveal Symbiotic Traits

(2021) Shicheng Chen et al.   Genes

Bacteriomic Analyses of Asian Citrus Psyllid and Citrus Samples Infected With “Candidatus Liberibacter asiaticus” in Southern California and Huanglongbing Management Implications

(2021) Jiaquan Huang et al.   Frontiers in Microbiology

16S rRNA Sequencing Detected Profftella, Liberibacter, Wolbachia, and Diplorickettsia from Relatives of the Asian Citrus Psyllid

(2020) Atsushi Nakabachi et al.   MICROBIAL ECOLOGY

Anatomical study of the female reproductive system and bacteriome of Diaphorina citri Kuwayama, (Insecta: Hemiptera, Liviidae) using micro-computed tomography

(2020) Ignacio Alba-Alejandre et al.   Scientific Reports

Inhibition of Asaia in Adult Mosquitoes Causes Male-Specific Mortality and Diverse Transcriptome Changes

(2020) Maria Vittoria Mancini et al.   Pathogens

Corrigendum to: IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative Genomics Underlines Multiple Roles of Profftella, an Obligate Symbiont of Psyllids: Providing Toxins, Vitamins, and Carotenoids

(2020) Atsushi Nakabachi et al.   Genome Biology and Evolution

metaFlye: scalable long-read metagenome assembly using repeat graphs

(2020) Mikhail Kolmogorov et al.   NATURE METHODS

A nonstructural protein responsible for viral spread of a novel insect reovirus provides a safe channel for biparental virus transmission to progeny

(2019) Qian Chen et al.   JOURNAL OF VIROLOGY

Diversity, Tissue Localization, and Infection Pattern of Bacterial Symbionts of the White-Backed Planthopper, Sogatella furcifera (Hemiptera: Delphacidae)

(2019) Fei Li et al.   MICROBIAL ECOLOGY

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities

(2019) James J Davis et al.   NUCLEIC ACIDS RESEARCH

Changes in Microbiota Across Developmental Stages of Aedes koreicus, an Invasive Mosquito Vector in Europe: Indications for Microbiota-Based Control Strategies

(2019) Niccolò Alfano et al.   Frontiers in Microbiology

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

Recurrent symbiont recruitment from fungal parasites in cicadas

(2018) Yu Matsuura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome Reduction in the Mosquito Symbiont Asaia

(2018) Diego Peres Alonso et al.   Genome Biology and Evolution

metaSPAdes: a new versatile metagenomic assembler

(2017) Sergey Nurk et al.   GENOME RESEARCH

Behavior of bacteriome symbionts during transovarial transmission and development of the Asian citrus psyllid

(2017) Hiroki Dan et al.   PLoS One

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

(2016) Minoru Kanehisa et al.   JOURNAL OF MOLECULAR BIOLOGY

Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis

(2016) Filip Husnik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complete genome and gene expression analyses ofAsaia bogorensisreveal unique responses to culture with mammalian cells as a potential opportunistic human pathogen

(2015) Mikihiko Kawai et al.   DNA RESEARCH

Inhibition of Plasmodium berghei Development in Mosquitoes by Effector Proteins Secreted from Asaia sp. Bacteria Using a Novel Native Secretion Signal

(2015) Nicholas J. Bongio et al.   PLoS One

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

(2015) Thomas Brettin et al.   Scientific Reports

Acetic Acid Bacteria Genomes Reveal Functional Traits for Adaptation to Life in Insect Guts

(2014) Bessem Chouaia et al.   Genome Biology and Evolution

Classification and evolution of type II CRISPR-Cas systems

(2014) Krzysztof Chylinski et al.   NUCLEIC ACIDS RESEARCH

Defensive Bacteriome Symbiont with a Drastically Reduced Genome

(2013) Atsushi Nakabachi et al.   CURRENT BIOLOGY

Asaiaaccelerates larval development ofAnopheles gambiae

(2013) Elvira Mitraka et al.   Pathogens and Global Health

Delayed larval development in Anopheles mosquitoes deprived of Asaia bacterial symbionts

(2012) Bessem Chouaia et al.   BMC MICROBIOLOGY

Survey of Endosymbionts in the Diaphorina citri Metagenome and Assembly of a Wolbachia wDi Draft Genome

(2012) Surya Saha et al.   PLoS One

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Associated Bacteria of Asian Citrus Psyllid (Hemiptera: Psyllidae:Diaphorina citri)

(2011) Mizuri Marutani-Hert et al.   SOUTHWESTERN ENTOMOLOGIST

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Paternal transmission of symbiotic bacteria in malaria vectors

(2008) Claudia Damiani et al.   CURRENT BIOLOGY

The Evolution of the Flagellar Assembly Pathway in Endosymbiotic Bacterial Genomes

(2008) C. Toft et al.   MOLECULAR BIOLOGY AND EVOLUTION

Long-Term Evolutionary Stability of Bacterial Endosymbiosis in Curculionoidea: Additional Evidence of Symbiont Replacement in the Dryophthoridae Family

(2008) Cyrille Conord et al.   MOLECULAR BIOLOGY AND EVOLUTION