Sulfur disproportionating microbial communities in a dynamic, microoxic‐sulfidic karst system

Sulfur disproportionation is exergonic in the vicinity of marine hydrothermal vents

(2022) Karine Alain et al.   ENVIRONMENTAL MICROBIOLOGY

Disproportionation of Inorganic Sulfur Compounds by Mesophilic Chemolithoautotrophic Campylobacterota

(2022) Shasha Wang et al.   mSystems

Bacterial Oxidases of the Cytochrome bd Family: Redox Enzymes of Unique Structure, Function and Utility as Drug Targets

(2020) Vitaliy Borisov et al.   ANTIOXIDANTS & REDOX SIGNALING

Tracing the Early Emergence of Microbial Sulfur Metabolisms

(2020) Patrick R. Morrison et al.   GEOMICROBIOLOGY JOURNAL

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

CHNOSZ: Thermodynamic Calculations and Diagrams for Geochemistry

(2019) Jeffrey M. Dick   Frontiers in Earth Science

Minireview: demystifying microbial reaction energetics

(2019) Jan P. Amend et al.   ENVIRONMENTAL MICROBIOLOGY

Sulfur isotope values in the sulfidic Frasassi cave system, central Italy: A case study of a chemolithotrophic S-based ecosystem

(2016) Aubrey L. Zerkle et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Sulfurovum riftiae sp. nov., a mesophilic, thiosulfate-oxidizing, nitrate-reducing chemolithoautotrophic epsilonproteobacterium isolated from the tube of the deep-sea hydrothermal vent polychaete Riftia pachyptila

(2016) Donato Giovannelli et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Biogeography of sulfur-oxidizing Acidithiobacillus populations in extremely acidic cave biofilms

(2016) Daniel S Jones et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The Terminal Oxidase Cytochrome bd Promotes Sulfide-resistant Bacterial Respiration and Growth

(2016) Elena Forte et al.   Scientific Reports

Fate of sulfide in the Frasassi cave system and implications for sulfuric acid speleogenesis

(2015) Daniel S. Jones et al.   CHEMICAL GEOLOGY

Structure and function of natural sulphide-oxidizing microbial mats under dynamic input of light and chemical energy

(2015) Judith M Klatt et al.   ISME Journal

Assessment of the stoichiometry and efficiency of CO2 fixation coupled to reduced sulfur oxidation

(2015) Judith M. Klatt et al.   Frontiers in Microbiology

Metagenomic insights into S(0) precipitation in a terrestrial subsurface lithoautotrophic ecosystem

(2015) Trinity L. Hamilton et al.   Frontiers in Microbiology

Microbial consumption of zero-valence sulfur in marine benthic habitats

(2014) Petra Pjevac et al.   ENVIRONMENTAL MICROBIOLOGY

Metagenomic Evidence for Sulfide Oxidation in Extremely Acidic Cave Biofilms

(2014) Daniel S. Jones et al.   GEOMICROBIOLOGY JOURNAL

Sulfurovum aggregans sp. nov., a hydrogen-oxidizing, thiosulfate-reducing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent chimney, and an emended description of the genus Sulfurovum

(2014) S. Mino et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Polysulfides as Intermediates in the Oxidation of Sulfide to Sulfate by Beggiatoa spp.

(2013) Jasmine S. Berg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Disproportionation of elemental sulfur by haloalkaliphilic bacteria from soda lakes

(2013) Alexander Poser et al.   EXTREMOPHILES

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds

(2013) Kai Waldemar Finster et al.   Standards in Genomic Sciences

Corrosion of limestone tablets in sulfidic ground-water: measurements and speleogenetic implications

(2012) Sandro Galdenzi   INTERNATIONAL JOURNAL OF SPELEOLOGY

Zero-valent sulphur is a key intermediate in marine methane oxidation

(2012) Jana Milucka et al.   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sulfur Respiration in a Marine Chemolithoautotrophic Beggiatoa Strain

(2012) Anne Schwedt et al.   Frontiers in Microbiology

The cytochrome bd respiratory oxygen reductases

(2011) Vitaliy B. Borisov et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Community genomic analysis of an extremely acidophilic sulfur-oxidizing biofilm

(2011) Daniel S Jones et al.   ISME Journal

Community Structure of Subsurface Biofilms in the Thermal Sulfidic Caves of Acquasanta Terme, Italy

(2010) D. S. Jones et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Structure of cbb3 Cytochrome Oxidase Provides Insights into Proton Pumping

(2010) S. Buschmann et al.   SCIENCE

Tracking Euxinia in the Ancient Ocean: A Multiproxy Perspective and Proterozoic Case Study

(2009) Timothy W. Lyons et al.   Annual Review of Earth and Planetary Sciences

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Oceanic Euxinia in Earth History: Causes and Consequences

(2008) Katja M. Meyer et al.   Annual Review of Earth and Planetary Sciences

Thiofaba tepidiphila gen. nov., sp. nov., a novel obligately chemolithoautotrophic, sulfur-oxidizing bacterium of the Gammaproteobacteria isolated from a hot spring

(2008) K. Mori et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Niche differentiation among sulfur-oxidizing bacterial populations in cave waters

(2008) Jennifer L Macalady et al.   ISME Journal

Microbiological disproportionation of inorganic sulfur compounds

(2008) Kai Finster   Journal of Sulfur Chemistry