Metagenomic Evidence for Sulfide Oxidation in Extremely Acidic Cave Biofilms

Characterization of the Type III sulfide:quinone oxidoreductase from Caldivirga maquilingensis and its membrane binding

(2012) Andrea M. Lencina et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Biodiversity, metabolism and applications of acidophilic sulfur-metabolizing microorganisms

(2012) Mark Dopson et al.   ENVIRONMENTAL MICROBIOLOGY

Acidithiobacillus caldus Sulfur Oxidation Model Based on Transcriptome Analysis between the Wild Type and Sulfur Oxygenase Reductase Defective Mutant

(2012) Linxu Chen et al.   PLoS One

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Efficient de novo assembly of large genomes using compressed data structures

(2011) J. T. Simpson et al.   GENOME RESEARCH

Community genomic analysis of an extremely acidophilic sulfur-oxidizing biofilm

(2011) Daniel S Jones et al.   ISME Journal

Mechanisms and Evolution of Oxidative Sulfur Metabolism in Green Sulfur Bacteria

(2011) Lea H. Gregersen et al.   Frontiers in Microbiology

Substrate Pathways and Mechanisms of Inhibition in the Sulfur Oxygenase Reductase of Acidianus Ambivalens

(2011) Andreas Veith et al.   Frontiers in Microbiology

Sulfur Metabolism in the Extreme Acidophile Acidithiobacillus Caldus

(2011) Stefanie Mangold et al.   Frontiers in Microbiology

Community Structure of Subsurface Biofilms in the Thermal Sulfidic Caves of Acquasanta Terme, Italy

(2010) D. S. Jones et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

(2010) Frederick A Matsen et al.   BMC BIOINFORMATICS

Crystal Structure of Sulfide:Quinone Oxidoreductase from Acidithiobacillus ferrooxidans: Insights into Sulfidotrophic Respiration and Detoxification

(2010) Maia M. Cherney et al.   JOURNAL OF MOLECULAR BIOLOGY

Autotrophic carbon fixation in archaea

(2010) Ivan A. Berg et al.   NATURE REVIEWS MICROBIOLOGY

Structural and Functional Insights into Sulfide:Quinone Oxidoreductase,

(2009) José A. Brito et al.   BIOCHEMISTRY

A novel symbiosis between chemoautotrophic bacteria and a freshwater cave amphipod

(2009) Sharmishtha Dattagupta et al.   ISME Journal

The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration

(2009) M. Marcia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A new structure-based classification of sulfide:quinone oxidoreductases

(2009) Marco Marcia et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Community-wide analysis of microbial genome sequence signatures

(2009) Gregory J Dick et al.   GENOME BIOLOGY

Niche differentiation among sulfur-oxidizing bacterial populations in cave waters

(2008) Jennifer L Macalady et al.   ISME Journal

Functional Analysis of Three Sulfide:Quinone Oxidoreductase Homologs inChlorobaculum tepidum

(2008) Leong-Keat Chan et al.   JOURNAL OF BACTERIOLOGY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION