Defining cat mitogenome variation and accounting for numts via multiplex amplification and Nanopore sequencing

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

(2022) Mantas Sereika et al.   NATURE METHODS

Animal Forensic Genetics

(2021) Adrian Linacre   Genes

Interpreting NUMTs in forensic genetics: Seeing the forest for the trees

(2021) Charla Marshall et al.   Forensic Science International-Genetics

Sequencing DNA with nanopores: Troubles and biases

(2021) Clara Delahaye et al.   PLoS One

A novel, 4-h DNA extraction method for STR typing of casework bone samples

(2020) Laila Hasap et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism

(2020) Reuben M. Buckley et al.   PLoS Genetics

Ultracontinuous single haplotype genome assemblies for the domestic cat (Felis catus) and Asian leopard cat (Prionailurus bengalensis)

(2020) Kevin R Bredemeyer et al.   JOURNAL OF HEREDITY

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

NanoPack: visualizing and processing long-read sequencing data

(2018) Wouter De Coster et al.   BIOINFORMATICS

Application of a mitochondrial DNA control region frequency database for UK domestic cats

(2017) Barbara Ottolini et al.   Forensic Science International-Genetics

A new view on the European feline population from mtDNA analysis in Polish domestic cats

(2017) Iwona Głażewska et al.   Forensic Science International-Genetics

Local populations and inaccuracies: Determining the relevant mitochondrial haplotype distributions for North West European cats

(2017) Monique Wesselink et al.   Forensic Science International-Genetics

NumtS colonization in mammalian genomes

(2017) F. M. Calabrese et al.   Scientific Reports

Establishing a database of Canadian feline mitotypes for forensic use

(2016) M. Arcieri et al.   Forensic Science International-Genetics

SNP Miniplexes for Individual Identification of Random-Bred Domestic Cats

(2016) Ashley Brooks et al.   JOURNAL OF FORENSIC SCIENCES

Feline mitochondrial DNA sampling for forensic analysis: When enough is enough!

(2015) Robert A. Grahn et al.   Forensic Science International-Genetics

Forensic utility of the feline mitochondrial control region – A Dutch perspective

(2015) Monique Wesselink et al.   Forensic Science International-Genetics

AliView: a fast and lightweight alignment viewer and editor for large datasets

(2014) Anders Larsson   BIOINFORMATICS

Acceptance of domestic cat mitochondrial DNA in a criminal proceeding

(2014) Leslie A. Lyons et al.   Forensic Science International-Genetics

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Feline non-repetitive mitochondrial DNA control region database for forensic evidence

(2010) R.A. Grahn et al.   Forensic Science International-Genetics

Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock

(2009) Pedro Soares et al.   AMERICAN JOURNAL OF HUMAN GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Degeneration of Nuclei and Mitochondria in Human Hairs

(2009) Charles A. Linch   JOURNAL OF FORENSIC SCIENCES