Fortune telling: metabolic markers of plant performance

ELAKCA: Enzyme-Linked Aptamer Kissing Complex Assay as a Small Molecule Sensing Platform

(2016) Benoit Chovelon et al.   ANALYTICAL CHEMISTRY

High-throughput platforms for metabolomics

(2016) Markus de Raad et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Metabolomic Assessment of Key Maize Resources: GC-MS and NMR Profiling of Grain from B73 Hybrids of the Nested Association Mapping (NAM) Founders and of Geographically Diverse Landraces

(2016) Tyamagondlu V. Venkatesh et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

FAIR principles for data stewardship

(2016)   NATURE GENETICS

Purple plants

(2016)   NATURE GENETICS

High-throughput estimation of incident light, light interception and radiation-use efficiency of thousands of plants in a phenotyping platform

(2016) Llorenç Cabrera-Bosquet et al.   NEW PHYTOLOGIST

Bulked sample analysis in genetics, genomics and crop improvement

(2016) Cheng Zou et al.   PLANT BIOTECHNOLOGY JOURNAL

Metabolites in Blood for Prediction of Bacteremic Sepsis in the Emergency Room

(2016) Anna M. Kauppi et al.   PLoS One

Canonical correlation analysis of high-dimensional data with very small sample support

(2016) Yang Song et al.   SIGNAL PROCESSING

Metabolic Biomarker Panels of Response to Fusarium Head Blight Infection in Different Wheat Varieties

(2016) Miroslava Cuperlovic-Culf et al.   PLoS One

A tutorial review: Metabolomics and partial least squares-discriminant analysis – a marriage of convenience or a shotgun wedding

(2015) Piotr S. Gromski et al.   ANALYTICA CHIMICA ACTA

Identification of a potential metabolic marker, inositol, for the inherently fast growth trait by stems of Pinus densiflora via a retrospective approach

(2015) Jun Won Kang et al.   CANADIAN JOURNAL OF FOREST RESEARCH

What the transcriptome does not tell — proteomics and metabolomics are closer to the plants’ patho-phenotype

(2015) Ivo Feussner et al.   CURRENT OPINION IN PLANT BIOLOGY

Metabolomic unveiling of a diverse range of green tea (Camellia sinensis) metabolites dependent on geography

(2015) Jang-Eun Lee et al.   FOOD CHEMISTRY

Metabolite Profiling of Diverse Rice Germplasm and Identification of Conserved Metabolic Markers of Rice Roots in Response to Long-Term Mild Salinity Stress

(2015) Myung Nam et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

First Trimester Urine and Serum Metabolomics for Prediction of Preeclampsia and Gestational Hypertension: A Prospective Screening Study

(2015) Marie Austdal et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Application of 1H NMR Profiling To Assess Seed Metabolomic Diversity. A Case Study on a Soybean Era Population

(2015) George G. Harrigan et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Current approaches and challenges for the metabolite profiling of complex natural extracts

(2015) Jean-Luc Wolfender et al.   JOURNAL OF CHROMATOGRAPHY A

Integrated Microfluidic Chip and Online SCX Separation Allows Untargeted Nanoscale Metabolomic and Peptidomic Profiling

(2015) Ravi Tharakan et al.   JOURNAL OF PROTEOME RESEARCH

Metabolic analyses of interspecific tomato recombinant inbred lines for fruit quality improvement

(2015) Mariana G. López et al.   Metabolomics

Modern plant metabolomics: advanced natural product gene discoveries, improved technologies, and future prospects

(2015) Lloyd W. Sumner et al.   NATURAL PRODUCT REPORTS

Growing access to phenotype data

(2015)   NATURE GENETICS

Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population

(2015) Weiwei Wen et al.   PLANT CELL

Automated phenotyping of plant shoots using imaging methods for analysis of plant stress responses – a review

(2015) Jan F Humplík et al.   Plant Methods

Metabolite profiles of maize leaves in drought, heat and combined stress field trials reveal the relationship between metabolism and grain yield

(2015) Toshihiro Obata et al.   PLANT PHYSIOLOGY

Biomarkers for Personalizing Omega-3 Fatty Acid Dosing

(2014) Y. Jiang et al.   Cancer Prevention Research

The emergent role of metabolic phenotyping in dynamic patient stratification

(2014) John C Lindon et al.   Expert Opinion on Drug Metabolism & Toxicology

Metabolomic approaches for orange origin discrimination by ultra-high performance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry

(2014) Ramon Díaz et al.   FOOD CHEMISTRY

Prediction of Muscat aroma in table grape by analysis of rose oxide

(2014) Leonor Ruiz-García et al.   FOOD CHEMISTRY

Analytical Method Evaluation and Discovery of Variation within Maize Varieties in the Context of Food Safety: Transcript Profiling and Metabolomics

(2014) Weiqing Zeng et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Effect of Environment and Genotype on Commercial Maize Hybrids Using LC/MS-Based Metabolomics

(2014) Hamid Baniasadi et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Variable influence on projection (VIP) for orthogonal projections to latent structures (OPLS)

(2014) Beatriz Galindo-Prieto et al.   JOURNAL OF CHEMOMETRICS

Comparative metabolomics and transcriptomics of plant response to Tomato yellow leaf curl virus infection in resistant and susceptible tomato cultivars

(2014) Dagan Sade et al.   Metabolomics

Assessing metabolomic and chemical diversity of a soybean lineage representing 35 years of breeding

(2014) Miyako Kusano et al.   Metabolomics

A metabolomics approach for predicting the response to neoadjuvant chemotherapy in cervical cancer patients

(2014) Yan Hou et al.   Molecular BioSystems

A robust, simple, high-throughput technique for time-resolved plant volatile analysis in field experiments

(2014) Mario Kallenbach et al.   PLANT JOURNAL

Dent and Flint maize diversity panels reveal important genetic potential for increasing biomass production

(2014) R. Rincent et al.   THEORETICAL AND APPLIED GENETICS

Prognostic biomarkers for prediction of recurrence of hepatocellular carcinoma: Current status and future prospects

(2014) Seow Chong Lee   WORLD JOURNAL OF GASTROENTEROLOGY

Statistical Spectroscopic Tools for Biomarker Discovery and Systems Medicine

(2013) Steven L. Robinette et al.   ANALYTICAL CHEMISTRY

Plant Metabolomics: From Holistic Data to Relevant Biomarkers

(2013) Jean-Luc Wolfender et al.   CURRENT MEDICINAL CHEMISTRY

Metabolomics for assessing safety and quality of plant-derived food

(2013) G. Oms-Oliu et al.   FOOD RESEARCH INTERNATIONAL

Review on metabolomics for food authentication

(2013) Elena Cubero-Leon et al.   FOOD RESEARCH INTERNATIONAL

Wine Metabolomics: Objective Measures of Sensory Properties of Semillon from GC-MS Profiles

(2013) Leigh M. Schmidtke et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Current metabolomics: Practical applications

(2013) Sastia P. Putri et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Recent advances in microfluidics combined with mass spectrometry: technologies and applications

(2013) Dan Gao et al.   LAB ON A CHIP

An NMR-based metabolomics study of pork from different crossbreeds and relation to sensory perception

(2013) Ida K. Straadt et al.   MEAT SCIENCE

A metabolomics based approach for understanding the influence of terroir in Vitis Vinifera L.

(2013) Paul T. Tarr et al.   Metabolomics

Application of nontargeted metabolite profiling to discover novel markers of quality traits in an advanced population of malting barley

(2013) Adam L. Heuberger et al.   PLANT BIOTECHNOLOGY JOURNAL

Phenoscope: an automated large-scale phenotyping platform offering high spatial homogeneity

(2013) Sébastien Tisné et al.   PLANT JOURNAL

Identification of Drought Tolerance Markers in a Diverse Population of Rice Cultivars by Expression and Metabolite Profiling

(2013) Thomas Degenkolbe et al.   PLoS One

Metabolomic signatures of aggressive prostate cancer

(2013) Jonathan E. McDunn et al.   PROSTATE

The maize leaf lipidome shows multilevel genetic control and high predictive value for agronomic traits

(2013) Christian Riedelsheimer et al.   Scientific Reports

A review of variable selection methods in Partial Least Squares Regression

(2012) Tahir Mehmood et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Maximizing the Reliability of Genomic Selection by Optimizing the Calibration Set of Reference Individuals: Comparison of Methods in Two Diverse Groups of Maize Inbreds (Zea mays L.)

(2012) R. Rincent et al.   GENETICS

Effects of Genetics and Environment on the Metabolome of Commercial Maize Hybrids: A Multisite Study

(2012) Vincent M. Asiago et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Challenges in the development of bioanalytical liquid chromatography–mass spectrometry method with emphasis on fast analysis

(2012) Lucie Nováková   JOURNAL OF CHROMATOGRAPHY A

Non-destructive measurement of vitamin C, total polyphenol and sugar content in apples using near-infrared spectroscopy

(2012) Audrey Pissard et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Toward the Detection of Prostate Cancer in Urine: A Critical Analysis

(2012) Matthew Truong et al.   JOURNAL OF UROLOGY

Metabolite target analysis of human urine combined with pattern recognition techniques for the study of symptomatic gout

(2012) Yun Liu et al.   Molecular BioSystems

Metabolomics approach for predicting response to neoadjuvant chemotherapy for breast cancer

(2012) Siwei Wei et al.   Molecular Oncology

Metabolic phenotyping in clinical and surgical environments

(2012) Jeremy K. Nicholson et al.   NATURE

Genomic and metabolic prediction of complex heterotic traits in hybrid maize

(2012) Christian Riedelsheimer et al.   NATURE GENETICS

Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize

(2012) C. Riedelsheimer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Water deficit and growth. Co-ordinating processes without an orchestrator?

(2011) François Tardieu et al.   CURRENT OPINION IN PLANT BIOLOGY

Any trait or trait-related allele can confer drought tolerance: just design the right drought scenario

(2011) F. Tardieu   JOURNAL OF EXPERIMENTAL BOTANY

Use of trehalose metabolism as a biochemical marker in rice breeding

(2011) Quistián-Martínez Deyanira et al.   MOLECULAR BREEDING

Phenomics – technologies to relieve the phenotyping bottleneck

(2011) Robert T. Furbank et al.   TRENDS IN PLANT SCIENCE

Strategies for elimination of cyanogens from cassava for reducing toxicity and improving food safety

(2010) Bala Nambisan   FOOD AND CHEMICAL TOXICOLOGY

NMR metabolomics of esca disease-affected Vitis vinifera cv. Alvarinho leaves

(2010) M. R. M. Lima et al.   JOURNAL OF EXPERIMENTAL BOTANY

Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes

(2010) B. Parent et al.   JOURNAL OF EXPERIMENTAL BOTANY

Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach

(2010) Matthias Steinfath et al.   PLANT BIOTECHNOLOGY JOURNAL

Network Analysis of Enzyme Activities and Metabolite Levels and Their Relationship to Biomass in a Large Panel of Arabidopsis Accessions

(2010) R. Sulpice et al.   PLANT CELL

Genetic Analysis of Central Carbon Metabolism Unveils an Amino Acid Substitution That Alters Maize NAD-Dependent Isocitrate Dehydrogenase Activity

(2010) Nengyi Zhang et al.   PLoS One

Classification of Tempranillo wines according to geographic origin: Combination of mass spectrometry based electronic nose and chemometrics

(2009) Wies Cynkar et al.   ANALYTICA CHIMICA ACTA

A novel application of metabolomics in vertebrate development

(2009) Shunsuke Hayashi et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The Metabolomic Responses ofCaenorhabditis elegansto Cadmium Are Largely Independent of Metallothionein Status, but Dominated by Changes in Cystathionine and Phytochelatins

(2009) Samantha L. Hughes et al.   JOURNAL OF PROTEOME RESEARCH

Marker-assisted wheat breeding: present status and future possibilities

(2009) P. K. Gupta et al.   MOLECULAR BREEDING

Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition

(2009) Marina Korn et al.   Molecular Plant

Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy

(2009) JAN HANNEMANN et al.   PLANT CELL AND ENVIRONMENT

Starch as a major integrator in the regulation of plant growth

(2009) R. Sulpice et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Not just a grain of rice: the quest for quality

(2009) Melissa A. Fitzgerald et al.   TRENDS IN PLANT SCIENCE

Metabolomic and flux-balance analysis of age-related decline of hypoxia tolerance in Drosophila muscle tissue

(2008) Laurence Coquin et al.   Molecular Systems Biology

Heterosis in the freezing tolerance, and sugar and flavonoid contents of crosses between Arabidopsis thaliana accessions of widely varying freezing tolerance

(2008) MARINA KORN et al.   PLANT CELL AND ENVIRONMENT

Genetics Meets Metabolomics: A Genome-Wide Association Study of Metabolite Profiles in Human Serum

(2008) Christian Gieger et al.   PLoS Genetics