Spatial distribution of sediment bacterial communities from São Francisco River headwaters is influenced by human land-use activities and seasonal climate shifts

Temporal and Spatial Patterns of Sediment Microbial Communities and Driving Environment Variables in a Shallow Temperate Mountain River

(2022) Wang Tian et al.   Microorganisms

Spatial and seasonal variations of sediment bacterial communities in a river-bay system in South China

(2021) Zhongyi Lu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Impacts of municipal wastewater treatment plant discharge on microbial community structure and function of the receiving river in Northwest Tibetan Plateau

(2021) Jiawen Wang et al.   JOURNAL OF HAZARDOUS MATERIALS

Spatiotemporal dynamics in microbial communities mediating biogeochemical cycling of nutrients across the Xiaowan Reservoir in Lancang River

(2021) Jiaxin Shi et al.   SCIENCE OF THE TOTAL ENVIRONMENT

PICRUSt2 for prediction of metagenome functions

(2020) Gavin M. Douglas et al.   NATURE BIOTECHNOLOGY

Fertilization accelerates the decomposition of microplastics in mollisols

(2020) Shaoliang Zhang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Effects of submerged vegetation on sediment nitrogen-cycling bacterial communities in Honghu Lake (China)

(2020) Haoping Wu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Dynamics of bacterial communities in a river water treatment wetland

(2019) Yong Liu et al.   ANNALS OF MICROBIOLOGY

Long-term effect of water diversion and CSOs on the remediation of heavy metals and microbial community in river sediments

(2019) Jun Wu et al.   WATER SCIENCE AND TECHNOLOGY

Impact of fecal contamination on surface water quality in the São Francisco River hydrographic basin in Minas Gerais, Brazil

(2019) Marina Salim Dantas et al.   JOURNAL OF WATER AND HEALTH

Microbial community structure and function in sediments from e-waste contaminated rivers at Guiyu area of China

(2018) Jun Liu et al.   ENVIRONMENTAL POLLUTION

Scaling up: A guide to high-throughput genomic approaches for biodiversity analysis

(2018) Teresita M. Porter et al.   MOLECULAR ECOLOGY

Metagenomic analysis of the bacterial communities and their functional profiles in water and sediments of the Apies River, South Africa, as a function of land use

(2018) Akebe Luther King Abia et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Seasonal distribution of nitrifiers and denitrifiers in urban river sediments affected by agricultural activities

(2018) Shan Huang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Sediment bacteria in an urban stream: Spatiotemporal patterns in community composition

(2018) Alescia A. Roberto et al.   WATER RESEARCH

Comparison among the microbial communities in the lake, lake wetland, and estuary sediments of a plain river network

(2018) Wei Huang et al.   MicrobiologyOpen

Bacterial community composition shaped by water chemistry and geographic distance in an anthropogenically disturbed river

(2018) Peng Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evaluation of violations in water quality standards in the monitoring network of São Francisco River basin, the third largest in Brazil

(2017) Elizângela Pinheiro da Costa et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Sediment bacterial communities in a eutrophic lake influenced by multiple inflow-rivers

(2017) Hainan Wu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Seasonal Variability May Affect Microbial Decomposers and Leaf Decomposition More Than Warming in Streams

(2016) Sofia Duarte et al.   MICROBIAL ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Characteristics of aquatic bacterial community and the influencing factors in an urban river

(2016) Peng Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Microbial responses to changes in flow status in temporary headwater streams: a cross-system comparison

(2015) Catherine M. Febria et al.   Frontiers in Microbiology

Population dynamics of nitrifying bacteria for nitritation achieved in Johannesburg (JHB) process treating municipal wastewater

(2014) Wei Zeng et al.   BIORESOURCE TECHNOLOGY

The Earth Microbiome project: successes and aspirations

(2014) Jack A Gilbert et al.   BMC BIOLOGY

Microbial diversity and biogeochemical cycling in soda lakes

(2014) Dimitry Y. Sorokin et al.   EXTREMOPHILES

Catchment-scale biogeography of riverine bacterioplankton

(2014) Daniel S Read et al.   ISME Journal

Characterization of Bacterial Communities in Sediments Receiving Various Wastewater Effluents with High-Throughput Sequencing Analysis

(2014) Xiao-Ming Lu et al.   MICROBIAL ECOLOGY

Human and Environmental Impacts on River Sediment Microbial Communities

(2014) Sean M. Gibbons et al.   PLoS One

Bacterial Community Composition in Three Freshwater Reservoirs of Different Alkalinity and Trophic Status

(2014) Marc Llirós et al.   PLoS One

Use of pyrosequencing to explore the benthic bacterial community structure in a river impacted by wastewater treatment plant discharges

(2014) Elisabet Marti et al.   RESEARCH IN MICROBIOLOGY

Physicochemical parameters aid microbial community? A case study from marine recreational beaches, Southern India

(2013) Sivanandham Vignesh et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Seasonal Dynamics and Community Structure of Bacterioplankton in Upper Paraná River Floodplain

(2013) Josiane Barros Chiaramonte et al.   MICROBIAL ECOLOGY

Stream Hydrological Fragmentation Drives Bacterioplankton Community Composition

(2013) Stefano Fazi et al.   PLoS One

Mechanisms determining the fate of dispersed bacterial communities in new environments

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

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Microbial CH4 and N2O Consumption in Acidic Wetlands

(2012) Steffen Kolb et al.   Frontiers in Microbiology

Structure and seasonal dynamics of bacterial communities in three urban rivers in China

(2011) Meiling Zhang et al.   AQUATIC SCIENCES

A global experiment suggests climate warming will not accelerate litter decomposition in streams but might reduce carbon sequestration

(2011) Luz Boyero et al.   ECOLOGY LETTERS

Homogenization patterns of the world's freshwater fish faunas

(2011) S. Villeger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effect of pesticide application on soil microorganisms

(2011) Anu Kalia et al.   Archives of Agronomy and Soil Science

Dynamics of a benthic microbial community in a riverine environment subject to hydrological fluctuations (Mulargia River, Italy)

(2010) Annamaria Zoppini et al.   HYDROBIOLOGIA

Global threats to human water security and river biodiversity

(2010) C. J. Vörösmarty et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Sediments in urban river basins: a review of sediment–contaminant dynamics in an environmental system conditioned by human activities

(2009) Kevin G. Taylor et al.   JOURNAL OF SOILS AND SEDIMENTS

Effect of Wastewater Treatment Plant Effluent on Microbial Function and Community Structure in the Sediment of a Freshwater Stream with Variable Seasonal Flow

(2008) S. A. Wakelin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantifying the effect of catchment land use and water nutrient concentrations on freshwater river and stream biodiversity

(2008) M. J. Weijters et al.   AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS

Lakes and streams as sentinels of environmental change in terrestrial and atmospheric processes

(2008) Craig E Williamson et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT