A novel algorithm to calculate elementary modes: Analysis of Campylobacter jejuni metabolism

Substrate Utilisation and Energy Metabolism in Non-Growing Campylobacter jejuni M1cam

(2022) Emily Stoakes et al.   Microorganisms

Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli

(2020) Tomokazu Ito et al.   JOURNAL OF BACTERIOLOGY

Genome-Scale Metabolic Model Driven Design of a Defined Medium for Campylobacter jejuni M1cam

(2020) Noemi Tejera et al.   Frontiers in Microbiology

Regulation of Respiratory Pathways in Campylobacterota: A Review

(2019) Anne-Xander van der Stel et al.   Frontiers in Microbiology

Identification of YbhA as the pyridoxal 5ʹ-phosphate (PLP) phosphatase in Escherichia coli: Importance of PLP homeostasis on the bacterial growth

(2017) Ryota Sugimoto et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

Generation of the membrane potential and its impact on the motility, ATP production and growth in Campylobacter jejuni

(2017) Anne-Xander van der Stel et al.   MOLECULAR MICROBIOLOGY

Physiologic hypoxia and oxygen homeostasis in the healthy intestine. A Review in the Theme: Cellular Responses to Hypoxia

(2015) Leon Zheng et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

Motility defects in Campylobacter jejuni defined gene deletion mutants caused by second-site mutations

(2015) Stefan P. W. de Vries et al.   MICROBIOLOGY-SGM

Differences in carbon source utilisation distinguish Campylobacter jejuni from Campylobacter coli

(2014) Sariqa Wagley et al.   BMC MICROBIOLOGY

Correlation Between Intraluminal Oxygen Gradient and Radial Partitioning of Intestinal Microbiota

(2014) Lindsey Albenberg et al.   GASTROENTEROLOGY

On dynamically generating relevant elementary flux modes in a metabolic network using optimization

(2014) Hildur Æsa Oddsdóttir et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Identification of potential drug targets in Salmonella enterica sv. Typhimurium using metabolic modelling and experimental validation

(2014) Hassan B. Hartman et al.   MICROBIOLOGY-SGM

Defining the metabolic requirements for the growth and colonization capacity of Campylobacter jejuni

(2014) Dirk Hofreuter   Frontiers in Cellular and Infection Microbiology

Nutrient Acquisition and Metabolism by Campylobacter jejuni

(2012) Martin Stahl et al.   Frontiers in Cellular and Infection Microbiology

Fast computation of minimal elementary decompositions of metabolic flux vectors

(2011) Raphael M. Jungers et al.   AUTOMATICA

Decomposing flux distributions into elementary flux modes in genome-scale metabolic networks

(2011) Siu Hung Joshua Chan et al.   BIOINFORMATICS

Fermentative metabolism by the human gut microbiota

(2010) A. Bernalier-Donadille   GASTROENTEROLOGIE CLINIQUE ET BIOLOGIQUE

Quantifying the Association between Campylobacter Infection and Guillain-Barré Syndrome: A Systematic Review

(2010) Kate O Poropatich et al.   JOURNAL OF HEALTH POPULATION AND NUTRITION

What is flux balance analysis?

(2010) Jeffrey D Orth et al.   NATURE BIOTECHNOLOGY

The B6 database: a tool for the description and classification of vitamin B6-dependent enzymatic activities and of the corresponding protein families

(2009) Riccardo Percudani et al.   BMC BIOINFORMATICS

The role of respiratory donor enzymes in Campylobacter jejuni host colonization and physiology

(2009) Dilan R. Weerakoon et al.   MICROBIAL PATHOGENESIS

Modes and cuts in metabolic networks: Complexity and algorithms

(2008) Vicente Acuña et al.   BIOSYSTEMS