Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance

The UCSC Genome Browser database: 2016 update

(2015) Matthew L. Speir et al.   NUCLEIC ACIDS RESEARCH

Granzyme A activates another way to die

(2015) Judy Lieberman   IMMUNOLOGICAL REVIEWS

Identification of SNP inHSP90AB1and its Association with the Relative Thermotolerance and Milk Production Traits in Indian Dairy Cattle

(2014) Basavaraj Sajjanar et al.   ANIMAL BIOTECHNOLOGY

Systematic review of the prevalence of paratuberculosis in cattle, sheep, and goats in Latin America and the Caribbean

(2014) Jorge Arturo Fernández-Silva et al.   TROPICAL ANIMAL HEALTH AND PRODUCTION

Detection of signatures of selective sweeps in the Blonde d'Aquitaine cattle breed

(2013) S. Boitard et al.   ANIMAL GENETICS

Informed and automated k-mer size selection for genome assembly

(2013) R. Chikhi et al.   BIOINFORMATICS

Genome-wide association study of infectious bovine keratoconjunctivitis in Angus cattle

(2013) Kadir Kizilkaya et al.   BMC GENETICS

Genome-wide association analysis identifies loci for left-sided displacement of the abomasum in German Holstein cattle

(2013) S. Mömke et al.   JOURNAL OF DAIRY SCIENCE

Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels

(2013) Jung-Woo Choi et al.   MOLECULES AND CELLS

Paratuberculose em ruminantes no Brasil

(2013) Elise M. Yamasaki et al.   PESQUISA VETERINARIA BRASILEIRA

Sod1 Deficiency Reduces Incubation Time in Mouse Models of Prion Disease

(2013) Shaheen Akhtar et al.   PLoS One

Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample

(2013) Aakrosh Ratan et al.   PLoS One

Comparative Transcriptome Analysis of Adipose Tissues Reveals that ECM-Receptor Interaction Is Involved in the Depot-Specific Adipogenesis in Cattle

(2013) Hyun-Jeong Lee et al.   PLoS One

In VitroPrevention ofSalmonellaLipopolysaccharide-Induced Damages in Epithelial Barrier Function by VariousLactobacillusStrains

(2013) Chun-Yan Yeung et al.   Gastroenterology Research and Practice

Comparison of Next-Generation Sequencing Systems

(2012) Lin Liu et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Genome Sequence and Assembly of Bos indicus

(2012) F. C. Canavez et al.   JOURNAL OF HEREDITY

GenBank

(2012) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

Animal QTLdb: an improved database tool for livestock animal QTL/association data dissemination in the post-genome era

(2012) Zhi-Liang Hu et al.   NUCLEIC ACIDS RESEARCH

Frequência de anticorpos para paratuberculose em bovinos no semiarido paraíbano

(2012) João Marcos de Araújo Medeiros et al.   PESQUISA VETERINARIA BRASILEIRA

Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle

(2012) D. M. Larkin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Next generation sequencing of African and Indicine cattle to identify single nucleotide polymorphisms

(2012) W. Barris et al.   Animal Production Science

Large and linked in scientific publishing

(2012) Laurie Goodman et al.   GigaScience

Genetic mapping of quantitative trait loci for meat quality and muscle metabolic traits in cattle

(2011) A. K. Esmailizadeh et al.   ANIMAL GENETICS

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

(2011) J. R. Grant et al.   BIOINFORMATICS

Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotyping

(2011) Bujie Zhan et al.   BMC GENOMICS

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

(2011) Paul Stothard et al.   BMC GENOMICS

Whole-genome resequencing shows numerous genes with nonsynonymous SNPs in the Japanese native cattle Kuchinoshima-Ushi

(2011) Ryouka Kawahara-Miki et al.   BMC GENOMICS

A quarter century of granzymes

(2011) C L Ewen et al.   CELL DEATH AND DIFFERENTIATION

A Critical Role for Granzymes in Antigen Cross-Presentation through Regulating Phagocytosis of Killed Tumor Cells

(2011) S. Hoves et al.   JOURNAL OF IMMUNOLOGY

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Ensembl 2012

(2011) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

Characterization of Abcc4 Gene Amplification in Stepwise-Selected Mouse J774 Macrophages Resistant to the Topoisomerase II Inhibitor Ciprofloxacin

(2011) Béatrice Marquez et al.   PLoS One

Polymorphisms in the bovine HSP90AB1 gene are associated with heat tolerance in Thai indigenous cattle

(2011) Rangsun Charoensook et al.   TROPICAL ANIMAL HEALTH AND PRODUCTION

Quantitative trait loci for organ weights and adipose fat composition in Jersey and Limousin back-cross cattle finished on pasture or feedlot

(2010) C. A. Morris et al.   ANIMAL GENETICS

Whole-Genome association analysis of susceptibility to paratuberculosis in Holstein cattle

(2010) B. W. Kirkpatrick et al.   ANIMAL GENETICS

Differentiation and Persistence of Memory CD8+ T Cells Depend on T Cell Factor 1

(2010) Xinyuan Zhou et al.   IMMUNITY

Genetic basis and inbreeding in the Brazilian Guzerat (Bos indicus) subpopulation selected for milk production

(2010) M.G.C.D. Peixoto et al.   Livestock Science

Tumor Necrosis Factor Alpha and Inflammation Disrupt the Polarity Complex in Intestinal Epithelial Cells by a Posttranslational Mechanism

(2010) A. Mashukova et al.   MOLECULAR AND CELLULAR BIOLOGY

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

(2010) Akihiro Fujimoto et al.   NATURE GENETICS

Ongoing and future developments at the Universal Protein Resource

(2010)   NUCLEIC ACIDS RESEARCH

Depletion of BIRC6 leads to retarded bovine early embryonic development and blastocyst formationin vitro

(2010) Dessie Salilew-Wondim et al.   REPRODUCTION FERTILITY AND DEVELOPMENT

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Assessing the heat tolerance of 17 beef cattle genotypes

(2009) J. B. Gaughan et al.   INTERNATIONAL JOURNAL OF BIOMETEOROLOGY

Pedigree analysis in the Brazilian Zebu breeds

(2009) F.J.C. Faria et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Paratuberculosis in a dairy Gyr herd in the State of Paraíba, Brazil

(2009) Pedro M.P.C. Mota et al.   PESQUISA VETERINARIA BRASILEIRA

The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

(2009) et al.   SCIENCE

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery

(2009) Sebastian H Eck et al.   GENOME BIOLOGY

A whole-genome assembly of the domestic cow, Bos taurus

(2009) Aleksey V Zimin et al.   GENOME BIOLOGY

Genes contributing to prion pathogenesis

(2008) G. Tamguney et al.   JOURNAL OF GENERAL VIROLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH