Integrative transcriptome and metabolome revealed the molecular mechanism of Bacillus megaterium BT22-mediated growth promotion in Arabidopsis thaliana

Transcriptome analysis of the growth-promoting effect of volatile organic compounds produced by Microbacterium aurantiacum GX14001 on tobacco (Nicotiana benthamiana)

(2022) Yahui Gao et al.   BMC PLANT BIOLOGY

Root Transcriptional and Metabolic Dynamics Induced by the Plant Growth Promoting Rhizobacterium (PGPR) Bacillus subtilis Mbi600 on Cucumber Plants

(2022) Anastasios Samaras et al.   Plants-Basel

Exploring biocontrol and growth-promoting potential of multifaceted PGPR isolated from natural suppressive soil against the causal agent of chickpea wilt

(2022) Iqra Fatima et al.   MICROBIOLOGICAL RESEARCH

Plant Growth-Promoting Microorganism Pseudarthrobacter sp. NIBRBAC000502770 Enhances the Growth and Flavonoid Content of Geum aleppicum

(2022) Seung Hee Ham et al.   Microorganisms

Beneficial Effect and Potential Risk of Pantoea on Rice Production

(2022) Luqiong Lv et al.   Plants-Basel

Inoculation of wheat with Bacillus sp. wp-6 altered amino acid and flavonoid metabolism and promoted plant growth

(2022) Yaguang Zhao et al.   PLANT CELL REPORTS

Drought-tolerant Bacillus megaterium isolated from semi-arid conditions induces systemic tolerance of wheat under drought conditions

(2021) Urooj Rashid et al.   PLANT CELL REPORTS

Interactional mechanisms of Paenibacillus polymyxa SC2 and pepper (Capsicum annuum L.) suggested by transcriptomics

(2021) Hu Liu et al.   BMC MICROBIOLOGY

Mitigation of Copper Stress in Maize (Zea mays) and Sunflower (Helianthus annuus) Plants by Copper-resistant Pseudomonas Strains

(2021) Payman Abbaszadeh-Dahaji et al.   CURRENT MICROBIOLOGY

The auxin-producing Bacillus thuringiensis RZ2MS9 promotes the growth and modifies the root architecture of tomato (Solanum lycopersicum cv. Micro-Tom)

(2021) Bruna Durante Batista et al.   ARCHIVES OF MICROBIOLOGY

Halotolerant bacteria mitigate the effects of salinity stress on soybean growth by regulating secondary metabolites and molecular responses

(2021) Muhammad Aaqil Khan et al.   BMC PLANT BIOLOGY

Comparative Transcriptomics and Metabolomics Reveal an Intricate Priming Mechanism Involved in PGPR-Mediated Salt Tolerance in Tomato

(2021) Ifigeneia Mellidou et al.   Frontiers in Plant Science

A Metabolomic Landscape of Maize Plants Treated With a Microbial Biostimulant Under Well-Watered and Drought Conditions

(2021) Lerato Nephali et al.   Frontiers in Plant Science

Plant Transcriptome Reprograming and Bacterial Extracellular Metabolites Underlying Tomato Drought Resistance Triggered by a Beneficial Soil Bacteria

(2021) Rafael Morcillo et al.   Metabolites

Competition for iron drives phytopathogen control by natural rhizosphere microbiomes

(2020) Shaohua Gu et al.   Nature Microbiology

Co-Inoculation of Bacillus velezensis Strain S141 and Bradyrhizobium Strains Promotes Nodule Growth and Nitrogen Fixation

(2020) Surachat Sibponkrung et al.   Microorganisms

Plant endophytes promote growth and alleviate salt stress in Arabidopsis thaliana

(2020) Di Fan et al.   Scientific Reports

Communication of plants with microbial world: Exploring the regulatory networks for PGPR mediated defense signaling

(2020) Sherien Bukhat et al.   MICROBIOLOGICAL RESEARCH

Plant growth promoting rhizobacteria alleviates drought stress in potato in response to suppressive oxidative stress and antioxidant enzymes activities

(2020) Tahira Batool et al.   Scientific Reports

Volatile organic compounds produced by Pseudomonas pseudoalcaligenes alleviated drought stress by modulating defense system in maize ( Zea mays L.)

(2020) Humaira Yasmin et al.   PHYSIOLOGIA PLANTARUM

Banana (Musa acuminata) transcriptome profiling in response to rhizobacteria: Bacillus amyloliquefaciens Bs006 and Pseudomonas fluorescens Ps006

(2019) Rocío M. Gamez et al.   BMC GENOMICS

Bacillus subtilis: A plant-growth promoting rhizobacterium that also impacts biotic stress

(2019) Abeer Hashem et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

PGPR-induced OsASR6 improves plant growth and yield by altering root auxin sensitivity and the xylem structure in transgenic Arabidopsis thaliana

(2019) Pallavi Agarwal et al.   JOURNAL OF PLANT PHYSIOLOGY

The effect of plant growth-promoting rhizobacteria (PGPR) on arsenic accumulation and the growth of rice plants (Oryza sativa L.)

(2019) Xiao AW et al.   CHEMOSPHERE

Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function

(2018) Jie Luo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Plant Growth-Promoting Rhizobacteria: Context, Mechanisms of Action, and Roadmap to Commercialization of Biostimulants for Sustainable Agriculture

(2018) Rachel Backer et al.   Frontiers in Plant Science

Auxin Response Dynamics During Wild-Type and entire Flower Development in Tomato

(2017) Shiri Goldental-Cohen et al.   PLANT AND CELL PHYSIOLOGY

From yogurt to yield: Potential applications of lactic acid bacteria in plant production

(2017) John R. Lamont et al.   SOIL BIOLOGY & BIOCHEMISTRY

Contribution of Zinc Solubilizing Bacteria in Growth Promotion and Zinc Content of Wheat

(2017) Sana Kamran et al.   Frontiers in Microbiology

Ethylene Role in Plant Growth, Development and Senescence: Interaction with Other Phytohormones

(2017) Noushina Iqbal et al.   Frontiers in Plant Science

Role of Ni-tolerant Bacillus spp. and Althea rosea L. in the phytoremediation of Ni-contaminated soils

(2016) Waheed Ullah Khan et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling

(2016) Riccardo Di Guida et al.   Metabolomics

Role of Plant Growth Promoting Rhizobacteria in Agricultural Sustainability—A Review

(2016) Pravin Vejan et al.   MOLECULES

Proteomic analyses of the interaction between the plant-growth promoting rhizobacteriumPaenibacillus polymyxaE681 andArabidopsis thaliana

(2016) Young Sang Kwon et al.   PROTEOMICS

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Root Associated Bacillus sp. Improves Growth, Yield and Zinc Translocation for Basmati Rice (Oryza sativa) Varieties

(2015) Muhammad Shakeel et al.   Frontiers in Microbiology

Dynamic Chemical Communication between Plants and Bacteria through Airborne Signals: Induced Resistance by Bacterial Volatiles

(2013) Mohamed A. Farag et al.   JOURNAL OF CHEMICAL ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

(2011) Warwick B Dunn et al.   Nature Protocols

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

ABA perception and signalling

(2010) Agepati S. Raghavendra et al.   TRENDS IN PLANT SCIENCE

Genome-wide comparative analysis of type-A Arabidopsis response regulator genes by overexpression studies reveals their diverse roles and regulatory mechanisms in cytokinin signaling

(2009) Bo Ren et al.   CELL RESEARCH

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Closely related receptor complexes differ in their ABA selectivity and sensitivity

(2009) Izabela Szostkiewicz et al.   PLANT JOURNAL

Assessment of PLSDA cross validation

(2008) Johan A. Westerhuis et al.   Metabolomics

Global inputs of biological nitrogen fixation in agricultural systems

(2008) David F. Herridge et al.   PLANT AND SOIL