Transcriptome Analysis of Resistant and Susceptible Pecan (Carya illinoinensis) Reveals the Mechanism of Resistance to Black Spot Disease (Colletotrichum fioriniae)

Controlling black spot of postharvest broccoli by Meyerozyma guilliermondii and its regulation on ROS metabolism of broccoli

(2022) Xiaoyun Zhang et al.   BIOLOGICAL CONTROL

H2O2 accumulation plays critical role in black spot disease resistance in roses

(2022) Shumin Yang et al.   Horticulture Environment and Biotechnology

Insights into the defense mechanisms involved in the induction of resistance against black spot of cherry tomatoes by Pichia caribbica

(2022) Xiaoyun Zhang et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Regulating Death and Disease: Exploring the Roles of Metacaspases in Plants and Fungi

(2022) Nalleli Garcia et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative study on fruit development and oil synthesis in two cultivars of Camellia oleifera

(2021) Fanhang Zhang et al.   BMC PLANT BIOLOGY

Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding

(2021) John T. Lovell et al.   Nature Communications

Effects of Low-Temperature Stress and Brassinolide Application on the Photosynthesis and Leaf Structure of Tung Tree Seedlings

(2020) Fanhang Zhang et al.   Frontiers in Plant Science

Identification of suitable reference genes for normalization of real-time quantitative PCR data in pecan (Carya illinoinensis)

(2020) Zhenghai Mo et al.   TREES-STRUCTURE AND FUNCTION

The Gene Ontology resource: enriching a GOld mine

(2020) et al.   NUCLEIC ACIDS RESEARCH

First report of anthracnose on pecan (Carya illinoensis) caused by Colletotrichum nymphaeae in China

(2019) Yabo Zhang et al.   PLANT DISEASE

Effect of trisodium phosphate treatment on black spot of apple fruit and the roles of anti-oxidative enzymes

(2019) Yonghong Ge et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition

(2019) Youjun Huang et al.   GigaScience

Identification of Cadmium-responsive Kandelia obovata SOD family genes and response to Cd toxicity

(2019) Chenglang Pan et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Transcriptome analysis reveals differences in the mechanisms of fiber initiation and elongation between long- and short-fiber cotton (Gossypium hirsutum L.) lines

(2019) Yuan Qin et al.   BMC GENOMICS

Sodium alginate potentiates antioxidant defense and PR proteins against early blight disease caused by Alternaria solani in Solanum lycopersicum Linn.

(2019) Priya Dey et al.   PLoS One

KofamKOALA: KEGG ortholog assignment based on profile HMM and adaptive score threshold

(2019) Takuya Aramaki et al.   BIOINFORMATICS

Exogenous polyamines enhance resistance to Alternaria alternata by modulating redox homeostasis in apricot fruit

(2019) Yongcai Li et al.   FOOD CHEMISTRY

Propagation of Pecan (Carya illinoensis): A review

(2018) Giuseppe Casales Fabrizio et al.   AFRICAN JOURNAL OF BIOTECHNOLOGY

PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools

(2018) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Expression of a rice GLP in Medicago truncatula exerting pleiotropic effects on resistance against Fusarium oxysporum through enhancing FeSOD-like activity

(2016) Tasawar Sultana et al.   ACTA PHYSIOLOGIAE PLANTARUM

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

De novo transcriptome assembly and development of SSR markers of oaks Quercus austrocochinchinensis and Q. kerrii (Fagaceae)

(2016) Miao An et al.   Tree Genetics & Genomes

Clones of FeSOD, MDHAR, DHAR Genes from White Clover and Gene Expression Analysis of ROS-Scavenging Enzymes during Abiotic Stress and Hormone Treatments

(2015) Yan Zhang et al.   MOLECULES

First Report ofPestalotiopsis microsporaas a Causal Agent of Black Spot of Pecan (Carya illinoinensis) in China

(2015) H. J. Shi et al.   PLANT DISEASE

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Studying Plant-Pathogen Interactions in the Genomics Era: Beyond Molecular Koch's Postulates to Systems Biology

(2010) David J. Schneider et al.   Annual Review of Phytopathology

RNA-Seq gene expression estimation with read mapping uncertainty

(2009) Bo Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

A Heterocomplex of Iron Superoxide Dismutases Defends Chloroplast Nucleoids against Oxidative Stress and Is Essential for Chloroplast Development in Arabidopsis

(2008) F. Myouga et al.   PLANT CELL