Direct prediction of carbapenem-resistant, carbapenemase-producing, and colistin-resistant Klebsiella pneumoniae isolates from routine MALDI-TOF mass spectra using machine learning and outcome evaluation

Direct antimicrobial resistance prediction from clinical MALDI-TOF mass spectra using machine learning

(2022) Caroline Weis et al.   NATURE MEDICINE

Evaluating NG-Test CARBA 5 Multiplex Immunochromatographic and Cepheid Xpert CARBA-R Assays among Carbapenem-Resistant Enterobacterales Isolates Associated with Bloodstream Infection

(2022) Yu-Tsung Huang et al.   Microbiology Spectrum

Well-being in the intensive care unit: Looking Beyond COVID-19

(2022) Sheela Pai Cole et al.   Anesthesiology Clinics

Rapid Identification of Methicillin-Resistant Staphylococcus aureus Using MALDI-TOF MS and Machine Learning from over 20,000 Clinical Isolates

(2022) Jiaxin Yu et al.   Microbiology Spectrum

Elevated Mortality Risk from CRKp Associated with Comorbidities: Systematic Review and Meta-Analysis

(2022) Lucas Candido Gonçalves Barbosa et al.   Antibiotics-Basel

Multicenter surveillance of antimicrobial susceptibilities and resistance mechanisms among Enterobacterales species and non-fermenting Gram-negative bacteria from different infection sources in Taiwan from 2016 to 2018

(2021) Shio-Shin Jean et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

Machine learning for identifying resistance features of Klebsiella pneumoniae using whole-genome sequence single nucleotide polymorphisms

(2021) Wenjia Liu et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Clinically Applicable System for Rapidly Predicting Enterococcus faecium Susceptibility to Vancomycin

(2021) Hsin-Yao Wang et al.   Microbiology Spectrum

Direct detection of intact Klebsiella pneumoniae carbapenemases produced by Enterobacterales using MALDI-TOF MS

(2020) Eun-Jeong Yoon et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Prediction of Antimicrobial Resistance in Gram-Negative Bacteria From Whole-Genome Sequencing Data

(2020) Pieter-Jan Van Camp et al.   Frontiers in Microbiology

Predicting Phenotypic Polymyxin Resistance in Klebsiella pneumoniae through Machine Learning Analysis of Genomic Data

(2020) Nenad Macesic et al.   mSystems

National Surveillance of Antimicrobial Susceptibility of Bacteremic Gram-Negative Bacteria with Emphasis on Community-Acquired Resistant Isolates: Report from the 2019 Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART)

(2020) Po-Yu Liu et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Comparison of clinical outcomes of patients infected with KPC- and NDM-producing Enterobacterales: a retrospective cohort study

(2020) Hyeonji Seo et al.   CLINICAL MICROBIOLOGY AND INFECTION

Inappropriate empirical antibiotic therapy for bloodstream infections based on discordant in-vitro susceptibilities: a retrospective cohort analysis of prevalence, predictors, and mortality risk in US hospitals

(2020) Sameer S Kadri et al.   LANCET INFECTIOUS DISEASES

Current Status of Matrix-Assisted Laser Desorption/Ionization–Time-of-Flight Mass Spectrometry (MALDI-TOF MS) in Clinical Diagnostic Microbiology

(2020) Sachio Tsuchida et al.   MOLECULES

Predicting antimicrobial resistance using conserved genes

(2020) Marcus Nguyen et al.   PLoS Computational Biology

International Consensus Guidelines for the Optimal Use of the Polymyxins: Endorsed by the American College of Clinical Pharmacy (ACCP), European Society of Clinical Microbiology and Infectious Diseases (ESCMID), Infectious Diseases Society of America (IDSA), International Society for Anti‐infective Pharmacology (ISAP), Society of Critical Care Medicine (SCCM), and Society of Infectious Diseases Pharmacists (SIDP)

(2019) Brian T. Tsuji et al.   PHARMACOTHERAPY

Current status of MALDI-TOF mass spectrometry in clinical microbiology

(2019) Tsung-Yun Hou et al.   JOURNAL OF FOOD AND DRUG ANALYSIS

New Drugs for Multidrug-Resistant Gram-Negative Organisms: Time for Stewardship

(2019) Shio-Shin Jean et al.   DRUGS

MALDI-TOF MS based procedure to detect KPC-2 directly from positive blood culture bottles and colonies

(2019) Roque Figueroa-Espinosa et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Nationwide surveillance of antimicrobial resistance among clinically important Gram-negative bacteria, with an emphasis on carbapenems and colistin: Results from the Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART) in 2018

(2019) Yu-Lin Lee et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

Optimization of the MALDIxin test for the rapid identification of colistin resistance in Klebsiella pneumoniae using MALDI-TOF MS

(2019) Laurent Dortet et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Rapid Discrimination of Methicillin-Resistant Staphylococcus aureus by MALDI-TOF MS

(2019) Kim et al.   Pathogens

Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes

(2018) Ana Rita Rebelo et al.   Eurosurveillance

Rapid detection of carbapenemase activity of Enterobacteriaceae isolated from positive blood cultures by MALDI-TOF MS

(2018) Jiajia Yu et al.   Annals of Clinical Microbiology and Antimicrobials

Antimicrobial susceptibility testing for polymyxins: challenges, issues, and recommendations

(2018) Fereshteh Ezadi et al.   JOURNAL OF CLINICAL MICROBIOLOGY

In vitro activity of ceftazidime–avibactam, ceftolozane–tazobactam, and other comparable agents against clinically important Gram-negative bacilli: results from the 2017 Surveillance of Multicenter Antimicrobial Resistance in Taiwan (SMART)

(2018) Shio-Shin Jean et al.   Infection and Drug Resistance

Carbapenemase-producing Klebsiella pneumoniae bloodstream infection in critically ill patients: risk factors and predictors of mortality

(2017) M. Papadimitriou-Olivgeris et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

The Epidemiology of Carbapenem-Resistant Enterobacteriaceae: The Impact and Evolution of a Global Menace

(2017) Latania K. Logan et al.   JOURNAL OF INFECTIOUS DISEASES

Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study

(2016) Yi-Yun Liu et al.   LANCET INFECTIOUS DISEASES

Risk factors and mortality in the Carbapenem-resistant Klebsiella pneumoniae infection: case control study

(2016) Fethiye Akgul et al.   Pathogens and Global Health

High-sensitivity MALDI-TOF MS quantification of anthrax lethal toxin for diagnostics and evaluation of medical countermeasures

(2015) Anne E. Boyer et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Treating infections caused by carbapenemase-producing Enterobacteriaceae

(2014) L.S. Tzouvelekis et al.   CLINICAL MICROBIOLOGY AND INFECTION

Identification of agr-positive methicillin-resistant Staphylococcus aureus harbouring the class A mec complex by MALDI-TOF mass spectrometry

(2014) Michaele Josten et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

National Surveillance Study on Carbapenem Non-Susceptible Klebsiella pneumoniae in Taiwan: The Emergence and Rapid Dissemination of KPC-2 Carbapenemase

(2013) Sheng-Kang Chiu et al.   PLoS One

Multiplex Detection of Protein Toxins Using MALDI-TOF-TOF Tandem Mass Spectrometry: Application in Unambiguous Toxin Detection from Bioaerosol

(2012) Syed Imteyaz Alam et al.   ANALYTICAL CHEMISTRY

Peptide Biomarker Discovery for Identification of Methicillin-Resistant and Vancomycin-Intermediate Staphylococcus aureus Strains by MALDI-TOF

(2012) Jang-Jih Lu et al.   ANALYTICAL CHEMISTRY

Predictors of Mortality in Bloodstream Infections Caused by Klebsiella pneumoniae Carbapenemase-Producing K. pneumoniae: Importance of Combination Therapy

(2012) M. Tumbarello et al.   CLINICAL INFECTIOUS DISEASES

High rate of colistin resistance among patients with carbapenem-resistant Klebsiella pneumoniae infection accounts for an excess of mortality

(2012) A. Capone et al.   CLINICAL MICROBIOLOGY AND INFECTION

Multiplex PCR for detection of acquired carbapenemase genes

(2011) Laurent Poirel et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

MALDI-TOF-MS for rapid detection of staphylococcal Panton–Valentine leukocidin

(2009) Fadi Bittar et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

The real threat of Klebsiella pneumoniae carbapenemase-producing bacteria

(2009) Patrice Nordmann et al.   LANCET INFECTIOUS DISEASES