Review
Oncology
Jacqueline A. Brinkman, Yue Liu, Stephen J. Kron
Summary: This article discusses the role of genotoxic therapy in cancer treatment and explores the potential of repurposing existing drugs and compounds as chemo or radiosensitizers. By studying cellular mechanisms as a framework, identifying which drugs and natural products have the most potential for repurposing is highlighted. The crucial next step is to conduct clinical trials to translate laboratory discoveries into benefiting patients.
SEMINARS IN CANCER BIOLOGY
(2021)
Review
Cell Biology
Taylor Lovsund, Fatemeh Mashayekhi, Amira Fitieh, James Stafford, Ismail Hassan Ismail
Summary: Detailing the connection between enzymatic families' homeostatic functions and tumorigenesis is crucial for understanding anti-cancer therapies. The PARP family, particularly known for its role in DNA repair and genomic stability, has multiple members involved in these processes. While several PARP inhibitors have been approved for clinical use, resistance to PARPi therapy is growing and requires new counter-resistance mechanisms. This review provides updated understanding of the homeostatic functions mediated by the PARP family, emphasizes the importance of PARPi therapies as anti-cancer agents, and discusses resistance mechanisms and counter-strategies.
Article
Oncology
Tingting Chen, Tong Yu, Shuping Zhuang, Yiding Geng, Junwen Xue, Jiayi Wang, Liqiang Ai, Bo Chen, Zhangxiang Zhao, Yawei Li, Jinghao Wang, Haihai Liang, Yan Xu, Yunyan Gu
Summary: This study developed a qualitative signature for detecting BRCAness in OvCa and showed that patients classified as BRCAness had improved overall survival and progression-free survival, as well as increased sensitivity to immune checkpoint blockade.
BRITISH JOURNAL OF CANCER
(2022)
Article
Engineering, Environmental
Yidan Ma, Xinyi Mu, Rufei Gao, Yan Zhang, Yanqing Geng, Xuemei Chen, Xin Yin, Fangfang Li, Junlin He
Summary: Maternal exposure to DBP resulted in significant abnormalities during meiotic prophase I in fetal ovaries, including delayed progression, impaired DNA damage response, uncoupled localization of DMC1 and RAD51, and decreased homologous recombination (HR). DBP negatively regulated lysine crotonylation (Kcr) of MSH6. F2 female mice exhibited premature follicular activation, precocious puberty, and anxiety-like behaviors.
JOURNAL OF HAZARDOUS MATERIALS
(2023)
Article
Biochemistry & Molecular Biology
Eva Ari Wahyuni, Chin-Yuan Yii, Hsiao-Lan Liang, Yueh-Hsia Luo, Sheng-Hua Yang, Pei-Yi Wu, Wei-Lun Hsu, Chung-Yi Nien, Ssu-Ching Chen
Summary: Selenocystine (SeC) has been identified as a novel compound with broad-spectrum anticancer activity. It selectively induces cytotoxicity and genotoxicity against HepG2 hepatoma cell line. SeC suppresses DNA homologous recombination repair and generates reactive oxygen species (ROS), leading to DNA damage and apoptosis.
CHEMICO-BIOLOGICAL INTERACTIONS
(2022)
Article
Plant Sciences
Koppolu Raja Rajesh Kumar
Summary: The DNA-dependent protein kinase catalytic subunit (DNA-PKcs) encoded by the PRKDC gene is essential for repairing DNA double-strand breaks in humans. It also has additional roles in transcriptional regulation, telomere protection, chromosomal integrity, and cellular processes. Dysregulation of DNA-PKcs is commonly observed in cancers. Recent studies have found that DNA-PKcs is conserved in green plants but not in angiosperms or basal angiosperms. Challenges in detecting DNA-PKcs sequences in plants are attributed to its long polypeptide and gene length. Alignment of sequences between plants and humans suggests possible structural and functional conservation, highlighting the potential significance of DNA-PKcs in plant biology.
FRONTIERS IN PLANT SCIENCE
(2023)
Review
Oncology
Giuseppe Caruso, Federica Tomao, Gabriella Parma, Mariateresa Lapresa, Francesco Multinu, Innocenza Palaia, Giovanni Aletti, Nicoletta Colombo
Summary: PARPi has become the standard of care in upfront treatment of advanced ovarian cancer, but there are still unresolved questions regarding maintenance therapy and the impact of PARPi on subsequent treatment needs to be studied.
INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER
(2023)
Review
Genetics & Heredity
Jamie Phipps, Karine Dubrana
Summary: DNA double-strand breaks (DSBs) are a harmful form of DNA damage that require robust repair mechanisms. The repair process is influenced by chromatin composition and dynamics, as well as 3D genome organization and break localization. The cohesin complex, involved in chromosome folding and sister chromatid cohesion, is emerging as a key player in DNA damage response, affecting repair pathway choice and efficiency.
Article
Biochemical Research Methods
Teruyuki Nishi, Yoichiro Ito, Yasuyuki Nakamura, Taiki Yamaji, Noriko Hashiba, Masaya Tamai, Yoshihiko Yasohara, Jun Ishii, Akihiko Kondo
Summary: In this study, a technique for in vivo DNA assembly and integration was established in the methylotrophic yeast species Komagataella phaffii. The use of a defective strain to improve gene targeting efficiency was demonstrated through the synthesis of green fluorescent protein and lycopene. This method allows for direct and easy engineering of K. phaffii strains.
ACS SYNTHETIC BIOLOGY
(2022)
Article
Chemistry, Multidisciplinary
Yong Wu, Siyu Chen, Yang Shao, Ying Su, Qin Li, Jiangchun Wu, Jun Zhu, Hao Wen, Yan Huang, Zhong Zheng, Xiaojun Chen, Xingzhu Ju, Shenglin Huang, Xiaohua Wu, Zhixiang Hu
Summary: This study identifies super-enhancer regulatory elements that are aberrantly activated in ovarian cancer (OC) and shows that they drive the expression of the transcription factor KLF5. KLF5 is associated with poor outcomes in OC patients and can promote tumor progression by enhancing the homologous recombination repair pathway and increasing PARP inhibitor resistance. The combination of SAHA and olaparib is found to significantly inhibit tumor growth and metastasis in PARP inhibitor-resistant OC cells with high KLF5 expression.
Review
Biochemistry & Molecular Biology
Christina Andronikou, Sven Rottenberg
Summary: This article summarizes the known mechanisms of PARPi resistance and highlights how studying PARP1-mediated chromatin remodeling may aid in further understanding PARPi resistance and developing new therapeutic approaches to overcome it.
TRENDS IN MOLECULAR MEDICINE
(2021)
Article
Oncology
Cecile Le Page, Setor Amuzu, Kurosh Rahimi, Walter Gotlieb, Jiannis Ragoussis, Patricia N. Tonin
Summary: BRCA1 and BRCA2 play crucial roles in maintaining genomic stability, with mutations in these genes contributing to cancer development. These mutations make HGSOC patients sensitive to certain treatments, but also prone to developing resistance.
SEMINARS IN CANCER BIOLOGY
(2021)
Review
Biochemistry & Molecular Biology
Yunhui Li, Jian Yuan
Summary: DNA is the hereditary material in humans and most other organisms, crucial for accurate transmission of genetic information. Damage to DNA, including DSBs, can lead to gene mutations, genome instability, and even tumorigenesis if repair mechanisms are defective. Protein deubiquitination is essential in DNA DSB repair, and understanding the molecular mechanisms of DUB regulation can provide insights for combatting human diseases and developing new therapeutic approaches.
JOURNAL OF ZHEJIANG UNIVERSITY-SCIENCE B
(2021)
Article
Biochemistry & Molecular Biology
Julia O'Sullivan, Charu Kothari, Marie-Christine Caron, Jean-Philippe Gagne, Zhigang Jin, Louis Nonfoux, Adele Beneyton, Yan Coulombe, Melissa Thomas, Nurgul Atalay, X. Wei Meng, Larissa Milano, Dominique Jean, Francois-Michel Boisvert, Scott H. Kaufmann, Michael J. Hendzel, Jean-Yves Masson, Guy G. Poirier
Summary: Zinc finger (ZNF) motifs are frequently occurring domains in the human genome and have recently been found to regulate genome integrity. This study identifies a novel PAR reader protein called ZNF432, which plays a key role in balancing the outcome of PARPi response by regulating homologous recombination.
NUCLEIC ACIDS RESEARCH
(2023)
Article
Biochemistry & Molecular Biology
Lisa Marie Krieger, Emil Mladenov, Aashish Soni, Marilen Demond, Martin Stuschke, George Iliakis
Summary: The decompaction of chromatin induced by hypotonic stress affects the processing and repair of DNA double-strand breaks (DSBs), leading to increased sensitivity of cells to ionizing radiation-induced damage and compromising genomic stability. This is achieved through suppression of homologous recombination (HR) and enhancement of error-prone processing by alternative end-joining (alt-EJ) and single-strand annealing (SSA).
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Engineering, Chemical
Mahmoud Kandeel, Mohamed A. A. Morsy, Hany M. M. Abd El-Lateef, Mohamed Marzok, Hossam S. S. El-Beltagi, Khalid M. M. Al Khodair, Ibrahim Albokhadaim, Katharigatta N. N. Venugopala
Summary: This study aimed to evaluate the efficacy and safety of lopinavir/ritonavir alone or in combination with interferon for the treatment of COVID-19. The analysis showed that lopinavir/ritonavir alone or in combination with interferon did not significantly outperform placebo in the treatment of COVID-19, and may be associated with more adverse events.
Article
Pharmacology & Pharmacy
Lina A. Dahabiyeh, Farah Hudaib, Wafa Hourani, Wesam Darwish, Bashaer Abu-Irmaileh, Pran Kishore Deb, Katharigatta N. Venugopala, Viresh Mohanlall, Sandeep Chandrashekharappa, Rana Abu-Dahab, Mohammad H. Semreen, Yasser Bustanji
Summary: In this study, the anticancer properties of seven synthesized 2,3-dihydroquinazolin-4(1H)-one analogues were investigated against two CRC cell lines. The compounds showed potent cytotoxic effects, suppressed wound closure, decreased the number of adherent cells, and inhibited cell invasion. Metabolomics analysis revealed significant perturbations in several metabolites and altered biochemical processes essential for cell proliferation and progression. Our findings suggest that these analogues, particularly C5, have promising anticancer properties and highlight the role of metabolomics in identifying therapeutic targets and understanding altered pathways in treated cancer cells.
EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES
(2023)
Article
Immunology
Mahmoud Kandeel, Mohamed A. Morsy, Hany M. Abd El-Lateef, Mohamed Marzok, Hossam S. El-Beltagi, Khalid M. Al Khodair, Ibrahim Albokhadaim, Katharigatta N. Venugopala
Summary: This study analyzed multiple clinical trials and found that high doses of current MERS-CoV vaccine candidates conferred better immunogenicity than low doses, and there were no differences in the safety of the vaccines.
INTERNATIONAL IMMUNOPHARMACOLOGY
(2023)
Article
Immunology
Mahmoud Kandeel, Mohamed A. Morsy, Hany M. Abd El-Lateef, Mohamed Marzok, Hossam S. El-Beltagi, Khalid M. Al Khodair, Ibrahim Albokhadaim, Katharigatta N. Venugopala
Summary: Background: There has been an increase in reported cases of monkeypox globally, leading to a study on the efficacy of two vaccines – modified vaccinia Ankara virus (MVA) vaccine and ACAM2000 vaccine – in preventing monkeypox. Methods: Primary data from various databases were analyzed, with a focus on humoral cell responses, adverse events, and rash reactions. Results: The JYNNEOS MVA vaccine showed a significantly higher humoral immune response and rash reaction compared to the ACAM2000 vaccine. However, ACAM2000 still provided protection against monkeypox, albeit with a lesser increase in neutralizing antibodies. Adverse reactions and rash reaction rates did not show statistically significant differences between the two vaccines. Conclusion: Both the ACAM2000 and JYNNEOS vaccines are effective in preventing monkeypox, despite differences in their modes of action and associated effects.
INTERNATIONAL IMMUNOPHARMACOLOGY
(2023)
Article
Chemistry, Physical
Christophe Tratrat, Nuhad A. Alomair, Hafedh Kochkar, Rasha Jubran al Malih, Michelyne Haroun, Samar Abubshait, Muhammad Younas, Gilles Berhault, Katharigatta N. Venugopala, Sreeharsha Nagaraja, Promise M. Emeka, Heba S. Elsewedy, Anroop B. Nair, Madiha Kamoun
Summary: The development of photocatalysts for selective esterification of aldehydes under visible light in the solar refinery is highly promising. This study focuses on the photo-assisted oxidation of benzaldehyde derivatives onto Sr-loaded TiO2 nanotubes, facilitating the conversion of aromatic aldehydes to esters under visible light. The addition of strontium induces the formation of oxygen vacancies and Ti3+ entities on the surface of the samples.
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY
(2023)
Review
Chemistry, Medicinal
Naga Tejaswi Uppumavuluri, Sri Ram Krovvidi, Raghu Prasad Mailavaram, Sujit Kumar Mohanty, Pran Kishore Deb, Katharigatta N. Venugopala
Summary: Tuberculosis is a re-emerging infectious disease that poses a threat to mankind. The current drugs are not fully effective against multiple/extensively resistant forms, and have serious side effects. Developing drugs targeting novel targets, such as Polyketide synthase 13 (Pks 13), is essential for treating tuberculosis.
MEDICINAL CHEMISTRY RESEARCH
(2023)
Article
Biochemistry & Molecular Biology
Michelyne Haroun, Maria Fesatidou, Anthi Petrou, Christophe Tratrat, Panagiotis Zagaliotis, Antonis Gavalas, Katharigatta N. N. Venugopala, Hafedh Kochkar, Promise M. M. Emeka, Nancy S. S. Younis, Dalia Ahmed Elmaghraby, Mervt M. M. Almostafa, Muhammad Shahzad Chohan, Ioannis S. S. Vizirianakis, Aliki Papadimitriou-Tsantarliotou, Athina Geronikaki
Summary: The major obstacles of using nonsteroidal anti-inflammatory drugs (NSAID) are the gastrointestinal toxicity caused by non-selective COX-1 and COX-2 inhibition and the cardiotoxicity associated with COX-2 selective inhibitors. Recent studies have shown that selective COX-1 and COX-2 inhibition can produce compounds without gastric damage. This study aims to develop novel anti-inflammatory agents with better gastric profiles.
Article
Pharmacology & Pharmacy
Anroop B. Nair, Bandar Aldhubiab, Jigar Shah, Shery Jacob, Mahesh Attimarad, Nagaraja Sreeharsha, Katharigatta N. Venugopala, Alex Joseph, Mohamed A. Morsy
Summary: This research aims to design and develop a transungual system for effective delivery of efinaconazole. Seven drug-loaded hydrogel formulations were prepared to evaluate the influence of solvent, cosolvent, and voltage on transungual delivery. Optimized transungual delivery exhibited significantly enhanced penetration and drug loading of efinaconazole.
Article
Agronomy
Mahmoud Kandeel, Mohamed A. A. Morsy, Hany M. M. Abd El-Lateef, Mohamed Marzok, Hossam S. S. El-Beltagi, Khalid M. M. Al Khodair, Ibrahim Albokhadaim, Katharigatta N. N. Venugopala
Summary: The B3 DNA-binding superfamily, containing a B3 domain, is involved in stress responses in Camelina sativa. A total of 87 members were identified and classified into five groups based on phylogenetic analysis. Most proteins were predicted to be located in the nucleus.
Review
Plant Sciences
Pottathil Shinu, Girdhari Lal Gupta, Manu Sharma, Shahzad Khan, Manoj Goyal, Anroop B. B. Nair, Manish Kumar, Wafaa E. E. Soliman, Aminur Rahman, Mahesh Attimarad, Katharigatta N. N. Venugopala, Abdullah Abdulhamid Ahmed Altaweel
Summary: Licorice, known as Glycyrrhiza glabra L., is a medicinal plant with the active component 18 beta GA, which has various pharmacological activities. This review examines the research on 18 beta GA in recent decades, demonstrating its therapeutic potential and possibilities for future drug development.
Review
Veterinary Sciences
Mahmoud Kandeel, Mohamed A. Morsy, Hany M. Abd El-Lateef, Mohamed Marzok, Hossam S. El-Beltagi, Khalid M. Al Khodair, Ibrahim Albokhadaim, Katharigatta N. Venugopala, Mohammed Al-Rasheed, Mahmoud M. Ismail
Summary: Publications are a significant indicator of scientific and technological progress, and bibliometrics is used to quantitatively analyze the number of publications in a specific research topic. This study aims to employ bibliometric analysis to provide comprehensive data on publications related to anticoccidial drugs.
FRONTIERS IN VETERINARY SCIENCE
(2023)
Review
Veterinary Sciences
Mahmoud Kandeel, Mohamed A. Morsy, Hany M. Abd El-Lateef, Mohamed Marzok, Hossam S. El-Beltagi, Khalid M. Al Khodair, Wafaa E. Soliman, Ibrahim Albokhadaim, Katharigatta N. Venugopala
Summary: This article employs bibliometric analysis to examine camel research over the past century, discussing major contributors, funding sources, academic institutions, scientific disciplines, and countries involved. The study finds an increasing interest in camel research in recent years, but highlights the need for greater support in areas related to camel health and production.
FRONTIERS IN VETERINARY SCIENCE
(2023)
Article
Chemistry, Medicinal
Mohamed A. A. Morsy, Seham A. A. Abdel-Gaber, Sahar A. A. Mokhemer, Mahmoud Kandeel, Wael F. F. Sedik, Anroop B. B. Nair, Katharigatta N. N. Venugopala, Hany Ezzat Khalil, Bandar E. E. Al-Dhubiab, Mervat Z. Z. Mohamed
Summary: The current study aimed to investigate the cardioprotective potential of pregnenolone against doxorubicin-induced cardiotoxicity. The results showed that pregnenolone could alleviate the side effects of doxorubicin on the heart, including histopathological changes and elevated levels of creatine kinase-MB and lactate dehydrogenase. Moreover, pregnenolone exhibited antioxidant, anti-inflammatory, and antiapoptotic effects, contributing to its cardioprotection in doxorubicin-treated rats.
Review
Pharmacology & Pharmacy
Naveen Kumar Reddy Chinnappanna, Gopi Yennam, Chaitanya Budagam Haima Naga Venkata Chaitanya, Shinu Pottathil, Pobitra Borah, Katharigatta N. Venugopala, Pran Kishore Deb, Raghu Prasad Mailavaram
Summary: Malaria is a global health issue with high mortality and morbidity rates. Limited treatment options and drug resistance have made the development of novel antimalarial agents a pressing need. Various approaches, including modification of existing drugs and creation of new compounds, are being explored to target different aspects of the parasite's biology.
ACTA PHARMACEUTICA
(2023)
Article
Chemistry, Multidisciplinary
Ramasamy Duraisamy, Prashantha Nagaraja, Aatika Nizam, N. Venugopala Katharigatta, Honnappa Nagarajaiah, M. B. Madhusudana Reddy, Dhakshnamurthy Thirumalai
Summary: Ammonium trifluoroacetate (ATA) catalysed synthesis of 1,2,5,6-tetrahydropyridine (THP) derivatives under eco-friendly conditions using a facile one-pot strategy is reported. Molecular docking simulation and in vitro inhibitory activity evaluation on MCF-7 breast cancer cell lines identified four potential hit candidates among the synthesized compounds. These compounds hold promise as potential lead molecules.