Genomic Variation across a Clinical Cryptococcus Population Linked to Disease Outcome
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Title
Genomic Variation across a Clinical Cryptococcus Population Linked to Disease Outcome
Authors
Keywords
-
Journal
mBio
Volume 13, Issue 6, Pages -
Publisher
American Society for Microbiology
Online
2022-11-10
DOI
10.1128/mbio.02626-22
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Note: Only part of the references are listed.- Amoeba Predation of Cryptococcus neoformans Results in Pleiotropic Changes to Traits Associated with Virulence
- (2021) Man Shun Fu et al. mBio
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- (2021) Chen-Hsin Yu et al. mBio
- Cryptococcus neoformans evades pulmonary immunity by modulating xylose precursor transport
- (2020) Lucy X. Li et al. INFECTION AND IMMUNITY
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- (2020) Linda C. Horianopoulos et al. mBio
- Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis
- (2019) Neil R.H. Stone et al. JOURNAL OF CLINICAL INVESTIGATION
- The mouse inhalation model of Cryptococcus neoformans infection recapitulates strain virulence in humans and shows closely related strains can possess differential virulence
- (2019) Liliane Mukaremera et al. INFECTION AND IMMUNITY
- Aneuploidy Enables Cross-Adaptation to Unrelated Drugs
- (2019) Feng Yang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans
- (2019) P. M. Ashton et al. Nature Communications
- Identification of Pathogen Genomic Differences That Impact Human Immune Response and Disease during Cryptococcus neoformans Infection
- (2019) Aleeza C. Gerstein et al. mBio
- Unveil the transcriptional landscape at the Cryptococcus-host axis in mice and nonhuman primates
- (2019) Hailong Li et al. PLoS Neglected Tropical Diseases
- Cryptococcus neoformans resists to drastic conditions by switching to viable but non-culturable cell phenotype
- (2019) Benjamin Hommel et al. PLoS Pathogens
- A New Lineage of Cryptococcus gattii (VGV) Discovered in the Central Zambezian Miombo Woodlands
- (2019) Rhys A. Farrer et al. mBio
- Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution
- (2018) Jordan E. Burke et al. CELL
- Antifungal Combinations for Treatment of Cryptococcal Meningitis in Africa
- (2018) Síle F. Molloy et al. NEW ENGLAND JOURNAL OF MEDICINE
- Genotypic analysis of clinical and environmental Cryptococcus neoformans isolates from Brazil reveals the presence of VNB isolates and a correlation with biological factors
- (2018) Leonardo Euripedes Andrade-Silva et al. PLoS One
- UDP-Glucuronic Acid Transport Is Required for Virulence of Cryptococcus neoformans
- (2018) Lucy X. Li et al. mBio
- Xylose donor transport is critical for fungal virulence
- (2018) Lucy X. Li et al. PLoS Pathogens
- Cryptococcus neoformans can form titan-like cells in vitro in response to multiple signals
- (2018) Nuria Trevijano-Contador et al. PLoS Pathogens
- Phenotypic Variability Correlates with Clinical Outcome in Cryptococcus Isolates Obtained from Botswanan HIV/AIDS Patients
- (2018) Kenya E. Fernandes et al. mBio
- Dissecting the Roles of the Calcineurin Pathway in Unisexual Reproduction, Stress Responses, and Virulence inCryptococcus deneoformans
- (2017) Ci Fu et al. GENETICS
- Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level
- (2017) Johanna Rhodes et al. GENETICS
- Cut-and-Paste Transposons in Fungi with Diverse Lifestyles
- (2017) Anna Muszewska et al. Genome Biology and Evolution
- Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans
- (2017) Christopher A. Desjardins et al. GENOME RESEARCH
- Global burden of disease of HIV-associated cryptococcal meningitis: an updated analysis
- (2017) Radha Rajasingham et al. LANCET INFECTIOUS DISEASES
- Microevolution of Serial Clinical Isolates of Cryptococcus neoformans var. grubii and C. gattii
- (2017) Yuan Chen et al. mBio
- A Population Genomics Approach to Assessing the Genetic Basis of Within-Host Microevolution Underlying Recurrent Cryptococcal Meningitis Infection
- (2017) Johanna Rhodes et al. G3-Genes Genomes Genetics
- Dissecting the Roles of the Calcineurin Pathway in Unisexual Reproduction, Stress Responses, and Virulence inCryptococcus deneoformans
- (2017) Ci Fu et al. GENETICS
- Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level
- (2017) Johanna Rhodes et al. GENETICS
- Cryptococcosis
- (2016) Eileen K. Maziarz et al. INFECTIOUS DISEASE CLINICS OF NORTH AMERICA
- Cryptococcus neoformans population diversity and clinical outcomes of HIV-associated cryptococcal meningitis patients in Zimbabwe
- (2016) Tinashe K. Nyazika et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Genomic epidemiology of Cryptococcus yeasts identifies adaptation to environmental niches underpinning infection across an African HIV/AIDS cohort
- (2016) Mathieu Vanhove et al. MOLECULAR ECOLOGY
- Validation of Genome-Wide Association Studies as a Tool to Identify Virulence Factors inParastagonospora nodorum
- (2016) Yuanyuan Gao et al. PHYTOPATHOLOGY
- Impact of Protein Palmitoylation on the Virulence Potential of Cryptococcus neoformans
- (2015) Connie B. Nichols et al. EUKARYOTIC CELL
- Comparative analyses of clinical and environmental populations ofCryptococcus neoformansin Botswana
- (2015) Yuan Chen et al. MOLECULAR ECOLOGY
- Cryptococcus neoformans Host Adaptation: Toward Biological Evidence of Dormancy
- (2015) Alexandre Alanio et al. mBio
- Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii
- (2015) Rhys A. Farrer et al. mBio
- Polyploid Titan Cells Produce Haploid and Aneuploid Progeny To Promote Stress Adaptation
- (2015) Aleeza C. Gerstein et al. mBio
- Genotypic Diversity Is Associated with Clinical Outcome and Phenotype in Cryptococcal Meningitis across Southern Africa
- (2015) Mathew A. Beale et al. PLoS Neglected Tropical Diseases
- Cerebrospinal Fluid Cytokine Profiles Predict Risk of Early Mortality and Immune Reconstitution Inflammatory Syndrome in HIV-Associated Cryptococcal Meningitis
- (2015) Joseph N. Jarvis et al. PLoS Pathogens
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- Lineage-specific expansions of TET/JBP genes and a new class of DNA transposons shape fungal genomic and epigenetic landscapes
- (2014) Lakshminarayan M. Iyer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Cryptococcus neoformans Transcriptome at the Site of Human Meningitis
- (2014) Y. Chen et al. mBio
- gitter: A Robust and Accurate Method for Quantification of Colony Sizes From Plate Images
- (2014) Omar Wagih et al. G3-Genes Genomes Genetics
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- (2014) Guilhem Janbon et al. PLoS Genetics
- Determinants of Mortality in a Combined Cohort of 501 Patients With HIV-Associated Cryptococcal Meningitis: Implications for Improving Outcomes
- (2013) Joseph N. Jarvis et al. CLINICAL INFECTIOUS DISEASES
- The Glucose Sensor-Like Protein Hxs1 Is a High-Affinity Glucose Transporter and Required for Virulence in Cryptococcus neoformans
- (2013) Tong-Bao Liu et al. PLoS One
- Geographically Structured Populations of Cryptococcus neoformans Variety grubii in Asia Correlate with HIV Status and Show a Clonal Population Structure
- (2013) Kantarawee Khayhan et al. PLoS One
- Comparative Genomics of Serial Isolates of Cryptococcus neoformans Reveals Gene Associated With Carbon Utilization and Virulence
- (2013) Kate L. Ormerod et al. G3-Genes Genomes Genetics
- Genome Wide Association Identifies Novel Loci Involved in Fungal Communication
- (2013) Javier Palma-Guerrero et al. PLoS Genetics
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- (2012) Matthias Kretschmer et al. EUKARYOTIC CELL
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Microevolution of Cryptococcus neoformans Driven by Massive Tandem Gene Amplification
- (2012) E. W. L. Chow et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome-wide efficient mixed-model analysis for association studies
- (2012) Xiang Zhou et al. NATURE GENETICS
- Cryptococcus and Beyond—Inositol Utilization and Its Implications for the Emergence of Fungal Virulence
- (2012) Chaoyang Xue PLoS Pathogens
- Variation in chromosome copy number influences the virulence of Cryptococcus neoformans and occurs in isolates from AIDS patients
- (2011) Guanggan Hu et al. BMC GENOMICS
- Cryptococcal Titan Cell Formation Is Regulated by G-Protein Signaling in Response to Multiple Stimuli
- (2011) Laura H. Okagaki et al. EUKARYOTIC CELL
- CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing
- (2011) A. Abyzov et al. GENOME RESEARCH
- Evidence that the Human Pathogenic Fungus Cryptococcus neoformans var. grubii May Have Evolved in Africa
- (2011) Anastasia P. Litvintseva et al. PLoS One
- Cryptococcus neoformans Requires a Functional Glycolytic Pathway for Disease but Not Persistence in the Host
- (2011) M. S. Price et al. mBio
- Deletion of Cryptococcus neoformans AIF Ortholog Promotes Chromosome Aneuploidy and Fluconazole-Resistance in a Metacaspase-Independent Manner
- (2011) Camile P. Semighini et al. PLoS Pathogens
- A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries
- (2011) Sheila Fisher et al. GENOME BIOLOGY
- Role of an Expanded Inositol Transporter Repertoire in Cryptococcus neoformans Sexual Reproduction and Virulence
- (2010) C. Xue et al. mBio
- Cryptococcus neoformans Overcomes Stress of Azole Drugs by Formation of Disomy in Specific Multiple Chromosomes
- (2010) Edward Sionov et al. PLoS Pathogens
- Independent Association between Rate of Clearance of Infection and Clinical Outcome of HIV‐Associated Cryptococcal Meningitis: Analysis of a Combined Cohort of 262 Patients
- (2009) Tihana Bicanic et al. CLINICAL INFECTIOUS DISEASES
- Iron Source Preference and Regulation of Iron Uptake in Cryptococcus neoformans
- (2008) Won Hee Jung et al. PLoS Pathogens
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