High polyphenolic cranberry beverage alters specific fecal microbiota but not gut permeability following aspirin challenge in healthy obese adults: A randomized, double-blind, crossover trial

Validation of a novel quality of life questionnaire: the Digestion-associated Quality of Life Questionnaire (DQLQ)

(2022) Matthew Beke et al.   Health and Quality of Life Outcomes

Faecalibacterium prausnitzii: A Next-Generation Probiotic in Gut Disease Improvement

(2021) Xiaoya He et al.   Canadian Journal of Infectious Diseases & Medical Microbiology

Human gut bacterial metabolism drives Th17 activation and colitis

(2021) Margaret Alexander et al.   Cell Host & Microbe

Mediterranean Diet Adherence in People With Parkinson's Disease Reduces Constipation Symptoms and Changes Fecal Microbiota After a 5-Week Single-Arm Pilot Study

(2021) Carley Rusch et al.   Frontiers in Neurology

A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria

(2020) Jordan E. Bisanz et al.   Cell Host & Microbe

Effects of yacon flour associated with an energy restricted diet on intestinal permeability, fecal short chain fatty acids, oxidative stress and inflammation markers levels in adults with obesity or overweight: a randomized, double blind, placebo controlled clinical trial

(2020) Adriane Moreira Machado et al.   Archives of Endocrinology Metabolism

Intestinal permeability in human nonalcoholic fatty liver disease: A systematic review and meta‐analysis

(2020) Toon J. I. De Munck et al.   LIVER INTERNATIONAL

Berry Polyphenols and Fibers Modulate Distinct Microbial Metabolic Functions and Gut Microbiota Enterotype-Like Clustering in Obese Mice

(2020) Maria-Carolina Rodríguez-Daza et al.   Frontiers in Microbiology

A polyphenol-rich dietary pattern improves intestinal permeability, evaluated as serum zonulin levels, in older subjects: The MaPLE randomised controlled trial

(2020) Cristian Del Bo' et al.   CLINICAL NUTRITION

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Cranberry extracts promote growth of Bacteroidaceae and decrease abundance of Enterobacteriaceae in a human gut simulator model

(2019) Kathleen O’Connor et al.   PLoS One

Effect of Diet on the Gut Microbiota: Rethinking Intervention Duration

(2019) Emily R Leeming et al.   Nutrients

Genetic basis for the cooperative bioactivation of plant lignans by Eggerthella lenta and other human gut bacteria

(2019) Elizabeth N. Bess et al.   Nature Microbiology

Chronic consumption of a low calorie, high polyphenol cranberry beverage attenuates inflammation and improves glucoregulation and HDL cholesterol in healthy overweight humans: a randomized controlled trial

(2018) Boon Chew et al.   EUROPEAN JOURNAL OF NUTRITION

Probiotic Bifidobacterium strains and galactooligosaccharides improve intestinal barrier function in obese adults but show no synergism when used together as synbiotics

(2018) Janina A. Krumbeck et al.   Microbiome

Gut microbiota, dietary intakes and intestinal permeability reflected by serum zonulin in women

(2018) S. Mörkl et al.   EUROPEAN JOURNAL OF NUTRITION

Next-Generation Beneficial Microbes: The Case of Akkermansia muciniphila

(2017) Patrice D. Cani et al.   Frontiers in Microbiology

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

(2017) Amnon Amir et al.   mSystems

Validity and reliability of the Bristol Stool Form Scale in healthy adults and patients with diarrhoea-predominant irritable bowel syndrome

(2016) M. R. Blake et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome

(2016) Marc A. Sze et al.   mBio

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Chemical characterization and chemo-protective activity of cranberry phenolic powders in a model cell culture. Response of the antioxidant defenses and regulation of signaling pathways

(2015) María Angeles Martín et al.   FOOD RESEARCH INTERNATIONAL

Akkermansia muciniphilaand improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

(2015) Maria Carlota Dao et al.   GUT

Cranberry Xyloglucan Structure and Inhibition of Escherichia coli Adhesion to Epithelial Cells

(2015) Arland T. Hotchkiss et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Cranberry Juice Consumption Lowers Markers of Cardiometabolic Risk, Including Blood Pressure and Circulating C-Reactive Protein, Triglyceride, and Glucose Concentrations in Adults

(2015) Janet A Novotny et al.   JOURNAL OF NUTRITION

Obesity, inflammation, and the gut microbiota

(2015) Amanda J Cox et al.   Lancet Diabetes & Endocrinology

A polyphenol-rich cranberry extract protects from diet-induced obesity, insulin resistance and intestinal inflammation in association with increasedAkkermansiaspp. population in the gut microbiota of mice

(2014) Fernando F Anhê et al.   GUT

Assessment of the Capability of a Gelling Complex Made of Tara Gum and the Exopolysaccharides Produced by the Microorganism Streptococcus thermophilus ST10 to Prospectively Restore the Gut Physiological Barrier

(2014) Mario Del Piano et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Application and Analysis of the Folin Ciocalteu Method for the Determination of the Total Phenolic Content from Limonium Brasiliense L.

(2013) Andressa Blainski et al.   MOLECULES

Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity

(2013) A. Everard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cranberry Proanthocyanidins Improve the Gut Mucous Layer Morphology and Function in Mice Receiving Elemental Enteral Nutrition

(2012) Joseph F. Pierre et al.   JOURNAL OF PARENTERAL AND ENTERAL NUTRITION

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Obesity and C-reactive protein in various populations: a systematic review and meta-analysis

(2012) J. Choi et al.   Obesity Reviews

The Automated Self-Administered 24-Hour Dietary Recall (ASA24): A Resource for Researchers, Clinicians, and Educators from the National Cancer Institute

(2012) Amy F. Subar et al.   Journal of the Academy of Nutrition and Dietetics

Susceptibility to gut leakiness: a possible mechanism for endotoxaemia in non-alcoholic steatohepatitis

(2010) Ashkan Farhadi et al.   LIVER INTERNATIONAL

Body mass index, waist circumference, and risk of coronary heart disease: A prospective study among men and women

(2010) Alan J. Flint et al.   Obesity Research & Clinical Practice

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Blocked Randomization with Randomly Selected Block Sizes

(2010) Jimmy Efird   International Journal of Environmental Research and Public Health

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS