Transcriptome Analysis and Screening of Genes Associated with Flower Size in Tomato (Solanum lycopersicum)

The GAMYB-like gene SlMYB33 mediates flowering and pollen development in tomato

(2020) Yan Zhang et al.   Horticulture Research

SlGT11 controls floral organ patterning and floral determinacy in tomato

(2020) Liling Yang et al.   BMC PLANT BIOLOGY

Arabidopsis ABF3 and ABF4 Transcription Factors Act with the NF-YC Complex to Regulate SOC1 Expression and Mediate Drought-Accelerated Flowering

(2019) Keumbi Hwang et al.   Molecular Plant

Metabolomic and Transcriptomic Analyses Reveal That a MADS-Box Transcription Factor TDR4 Regulates Tomato Fruit Quality

(2019) Xiaodan Zhao et al.   Frontiers in Plant Science

Functional analysis of SlNCED1 in pistil development and fruit set in tomato (Solanum lycopersicum L.)

(2019) Wenbin Kai et al.   Scientific Reports

The bZip transcription factor HY5 mediates CRY1a -induced anthocyanin biosynthesis in tomato

(2018) Chao-Chao Liu et al.   PLANT CELL AND ENVIRONMENT

TOMATO AGAMOUS1 and ARLEQUIN/TOMATO AGAMOUS-LIKE1 MADS-box genes have redundant and divergent functions required for tomato reproductive development

(2016) Estela Gimenez et al.   PLANT MOLECULAR BIOLOGY

The tomato floral homeotic protein FBP1-like gene, SlGLO1, plays key roles in petal and stamen development

(2016) Xuhu Guo et al.   Scientific Reports

Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte

(2016) Antónia Gibalová et al.   Plant Reproduction

Characterization of vegetative inflorescence (mc-vin) mutant provides new insight into the role of MACROCALYX in regulating inflorescence development of tomato

(2016) Fernando J. Yuste-Lisbona et al.   Scientific Reports

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Omics Approaches Toward Defining the Comprehensive Abscisic Acid Signaling Network in Plants

(2015) T. Yoshida et al.   PLANT AND CELL PHYSIOLOGY

A novel strategy to produce sweeter tomato fruits with high sugar contents by fruit-specific expression of a single bZIP transcription factor gene

(2015) G. H. M. Sagor et al.   PLANT BIOTECHNOLOGY JOURNAL

Abscisic-acid-dependent basic leucine zipper (bZIP) transcription factors in plant abiotic stress

(2015) Aditya Banerjee et al.   PROTOPLASMA

FourArabidopsis AREB/ABF transcription factors function predominantly in gene expression downstream of SnRK2 kinases in abscisic acid signalling in response to osmotic stress

(2014) TAKUYA YOSHIDA et al.   PLANT CELL AND ENVIRONMENT

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Molecular regulation of seed and fruit set

(2012) Yong-Ling Ruan et al.   TRENDS IN PLANT SCIENCE

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Hidden Variability of Floral Homeotic B Genes in Solanaceae Provides a Molecular Basis for the Evolution of Novel Functions

(2010) K. Geuten et al.   PLANT CELL

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Regulatory Features Underlying Pollination-Dependent and -Independent Tomato Fruit Set Revealed by Transcript and Primary Metabolite Profiling

(2009) H. Wang et al.   PLANT CELL

Fleshy Fruit Expansion and Ripening Are Regulated by the Tomato SHATTERPROOF Gene TAGL1

(2009) J. Vrebalov et al.   PLANT CELL

Identification and characterization of bZIP-type transcription factors involved in carrot (Daucus carotaL.) somatic embryogenesis

(2009) Yucheng Guan et al.   PLANT JOURNAL

A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance

(2008) Meijuan Zou et al.   PLANT MOLECULAR BIOLOGY