Liver transcriptome analysis reveals changes in energy metabolism, oxidative stress, and apoptosis in pearl gentian grouper exposed to acute hypoxia

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(2014) R. Shapawi et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

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(2013) Pål A Olsvik et al.   BMC GENOMICS

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(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

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(2010) J. G. Richards   JOURNAL OF EXPERIMENTAL BIOLOGY

Fish as model systems for the study of vertebrate apoptosis

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WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

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