Flux Control in Glycolysis Varies Across the Tree of Life

‘Super-perfect’ enzymes: Structural stabilities and activities of recombinant triose phosphate isomerases from Pyrococcus furiosus and Thermococcus onnurineus produced in Escherichia coli

(2015) Prerna Sharma et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast

(2015) Russell A. Hermansen et al.   BMC EVOLUTIONARY BIOLOGY

The Influence of Selection for Protein Stability on dN/dS Estimations

(2014) Pouria Dasmeh et al.   Genome Biology and Evolution

Structural analysis of glyceraldehyde-3-phosphate dehydrogenase functional diversity

(2014) Michael A. Sirover   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Ensembl 2015

(2014) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

Proteins Involved in Motility and Sperm-Egg Interaction Evolve More Rapidly in Mouse Spermatozoa

(2014) Alberto Vicens et al.   PLoS One

METABOLIC FLUX IS A DETERMINANT OF THE EVOLUTIONARY RATES OF ENZYME-ENCODING GENES

(2013) Martino Colombo et al.   EVOLUTION

Evidence of a triosephosphate isomerase non-catalytic function crucial to behavior and longevity

(2013) B. P. Roland et al.   JOURNAL OF CELL SCIENCE

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

(2013) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Evolutionary diversification of the multimeric states of proteins

(2013) M. Lynch   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stepwise Evolution of Essential Centromere Function in a Drosophila Neogene

(2013) B. D. Ross et al.   SCIENCE

The relationship between the hierarchical position of proteins in the human signal transduction network and their rate of evolution

(2012) David Alvarez-Ponce   BMC EVOLUTIONARY BIOLOGY

THE EVOLUTION OF GENES IN BRANCHED METABOLIC PATHWAYS

(2012) Mark D. Rausher   EVOLUTION

Evolution of Flux Control in the Glucosinolate Pathway in Arabidopsis thaliana

(2012) Carrie F. Olson-Manning et al.   MOLECULAR BIOLOGY AND EVOLUTION

Amino acid coevolution induces an evolutionary Stokes shift

(2012) D. D. Pollock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

Active-site remodelling in the bifunctional fructose-1,6-bisphosphate aldolase/phosphatase

(2011) Juan Du et al.   NATURE

Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase

(2011) Shinya Fushinobu et al.   NATURE

GeneDB--an annotation database for pathogens

(2011) F. J. Logan-Klumpler et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

The diverse functions of GAPDH: Views from different subcellular compartments

(2010) Carlos Tristan et al.   CELLULAR SIGNALLING

Comparative Genomics of the Vertebrate Insulin/TOR Signal Transduction Pathway: A Network-Level Analysis of Selective Pressures

(2010) David Alvarez-Ponce et al.   Genome Biology and Evolution

Selection and the Cell Cycle: Positive Darwinian Selection in a Well-Known DNA Damage Response Pathway

(2010) Mary J. O’Connell   JOURNAL OF MOLECULAR EVOLUTION

AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species

(2010) C. Aurrecoechea et al.   NUCLEIC ACIDS RESEARCH

Plasticity of Animal Genome Architecture Unmasked by Rapid Evolution of a Pelagic Tunicate

(2010) F. Denoeud et al.   SCIENCE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Phosphoglycerate Kinase 2 (PGK2) Is Essential for Sperm Function and Male Fertility in Mice1

(2009) Polina V. Danshina et al.   BIOLOGY OF REPRODUCTION

The Evolution of Control and Distribution of Adaptive Mutations in a Metabolic Pathway

(2009) K. M. Wright et al.   GENETICS

Degradation of Functional Triose Phosphate Isomerase Protein Underlies sugarkill Pathology

(2008) Jacquelyn L. Seigle et al.   GENETICS

Update of KDBI: Kinetic Data of Bio-molecular Interaction database

(2008) P. Kumar et al.   NUCLEIC ACIDS RESEARCH