Appropriate crop rotation alleviates continuous cropping barriers by changing rhizosphere microorganisms in Panax notoginseng

Effects of inorganic and organic treatments on the microbial community of maize rhizosphere by a shotgun metagenomics approach

(2020) Matthew Chekwube Enebe et al.   ANNALS OF MICROBIOLOGY

Diversity patterns of soil microbial communities in the Sophora flavescens rhizosphere in response to continuous monocropping

(2020) Haiying Lei et al.   BMC MICROBIOLOGY

A Plant-Growth Promoting Bacterium Alters the Microbial Community of Continuous Cropping Poplar Trees Rhizosphere

(2019) Junkang Sui et al.   JOURNAL OF APPLIED MICROBIOLOGY

Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots

(2019) Samiran Banerjee et al.   ISME Journal

Reductive soil disinfestation effectively alleviates the replant failure of Sanqi ginseng through allelochemical degradation and pathogen suppression

(2019) Yunlong Li et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Effects of maize rotation on the physicochemical properties and microbial communities of American ginseng cultivated soil

(2019) Xiao-Lin Jiao et al.   Scientific Reports

Long-term continuous cropping of soybean is comparable to crop rotation in mediating microbial abundance, diversity and community composition

(2019) Zhuxiu Liu et al.   SOIL & TILLAGE RESEARCH

Manipulation of microbial community in the rhizosphere alleviates the replanting issues in Panax ginseng

(2018) Linlin Dong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Panax notoginseng Root Cell Death Caused by the Autotoxic Ginsenoside Rg1 Is Due to Over-Accumulation of ROS, as Revealed by Transcriptomic and Cellular Approaches

(2018) Min Yang et al.   Frontiers in Plant Science

Rhizospheric microbial communities are driven by Panax ginseng at different growth stages and biocontrol bacteria alleviates replanting mortality

(2018) Linlin Dong et al.   Acta Pharmaceutica Sinica B

Crop rotation and residue management effects on soil enzyme activities, glomalin and aggregate stability under zero tillage in the Indo-Gangetic Plains

(2018) Geeta Singh et al.   SOIL & TILLAGE RESEARCH

Diversity and composition of bacterial endophytes among plant parts of Panax notoginseng

(2018) Linlin Dong et al.   Chinese Medicine

How green alternatives to chemical pesticides are environmentally friendly and more efficient

(2018) X. Q. Huang et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Rhizospheric fungi and their link with the nitrogen-fixing Frankia harbored in host plant Hippophae rhamnoides L

(2017) Xue Zhou et al.   JOURNAL OF BASIC MICROBIOLOGY

Diversity and composition of rhizospheric soil and root endogenous bacteria inPanax notoginsengduring continuous cropping practices

(2017) Yong Tan et al.   JOURNAL OF BASIC MICROBIOLOGY

Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation

(2017) Maria G. Pachiadaki et al.   SCIENCE

Soil networks become more connected and take up more carbon as nature restoration progresses

(2017) Elly Morriën et al.   Nature Communications

Factors influencing crop rotation strategies on organic farms with different time periods since conversion to organic production

(2016) Iman Raj Chongtham et al.   BIOLOGICAL AGRICULTURE & HORTICULTURE

The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages

(2016) Shengjing Shi et al.   ECOLOGY LETTERS

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

(2016) Bin Ma et al.   ISME Journal

Garlic exerts allelopathic effects on pepper physiology in a hydroponic co-culture system

(2016) Haiyan Ding et al.   Biology Open

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Soil Health Paradigms and Implications for Disease Management

(2015) Robert P. Larkin   Annual Review of Phytopathology

Systematics of the Trichoderma harzianum species complex and the re-identification of commercial biocontrol strains

(2015) Priscila Chaverri et al.   MYCOLOGIA

Rhizosphere bacteria and fungi associated with plant growth in soils of three replanted apple orchards

(2015) Ingrid H. Franke-Whittle et al.   PLANT AND SOIL

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Contrasting elevational diversity patterns between eukaryotic soil microbes and plants

(2014) Congcong Shen et al.   ECOLOGY

Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing

(2014) Wu Xiong et al.   MICROBIAL ECOLOGY

Microbial Community Diversities and Taxa Abundances in Soils along a Seven-Year Gradient of Potato Monoculture Using High Throughput Pyrosequencing Approach

(2014) Xing Liu et al.   PLoS One

Fungal pathogen accumulation at the expense of plant-beneficial fungi as a consequence of consecutive peanut monoculturing

(2014) Xiao-gang Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Characterization of a new marine nitrite oxidizing bacterium, Nitrospina watsonii sp. nov., a member of the newly proposed phylum “Nitrospinae”

(2014) Eva Spieck et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Induced soil microbial suppression of banana fusarium wilt disease using compost and biofertilizers to improve yield and quality

(2013) Zongzhuan Shen et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Application of targeted metagenomics to explore abundance and diversity of CO2-fixing bacterial community using cbbL gene from the rhizosphere of Arachis hypogaea

(2012) Basit Yousuf et al.   GENE

FLASH assembly of TALENs for high-throughput genome editing

(2012) Deepak Reyon et al.   NATURE BIOTECHNOLOGY

Soil microbial communities associated with the rhizosphere of cucumber under different summer cover crops and residue management: A 4-year field experiment

(2012) Yongqiang Tian et al.   SCIENTIA HORTICULTURAE

Appraisal of the crop-rotation effect of rhizobial inoculation on potato cropping systems in relation to soil bacterial communities

(2012) Darine Trabelsi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils

(2011) Heiko Nacke et al.   PLoS One

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

hi2-1, A QTL which improves harvest index, earliness and alters metabolite accumulation of processing tomatoes

(2010) Amit Gur et al.   THEORETICAL AND APPLIED GENETICS

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impact of wheat straw decomposition on successional patterns of soil microbial community structure

(2008) Fabiola Bastian et al.   SOIL BIOLOGY & BIOCHEMISTRY