Nitrogen Fertilizer Application Alters the Root Endophyte Bacterial Microbiome in Maize Plants, but Not in the Stem or Rhizosphere Soil

Application of ammonium to a N limited arable soil enriches a succession of bacteria typically found in the rhizosphere

(2022) Mario Hernández-Guzmán et al.   Scientific Reports

The root endophytic bacterial community of Ricinus communis L. resembles the seeds community more than the rhizosphere bacteria independent of soil water content

(2021) Stephanie E. Hereira-Pacheco et al.   Scientific Reports

Bacterial endophytes: Molecular interactions with their hosts

(2021) Surjit S. Dudeja et al.   JOURNAL OF BASIC MICROBIOLOGY

Plant–Microbiome Crosstalk: Dawning from Composition and Assembly of Microbial Community to Improvement of Disease Resilience in Plants

(2021) Muhammad Noman et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The Mexican giant maize of Jala landrace harbour plant-growth-promoting rhizospheric and endophytic bacteria

(2021) Bibiana Rios-Galicia et al.   3 Biotech

Seed-Transmitted Bacteria and Fungi Dominate Juvenile Plant Microbiomes

(2021) David Johnston-Monje et al.   Frontiers in Microbiology

Functional Genomics Insights Into the Pathogenicity, Habitat Fitness, and Mechanisms Modifying Plant Development of Rhodococcus sp. PBTS1 and PBTS2

(2020) Danny Vereecke et al.   Frontiers in Microbiology

Mesorhizobium terrae sp. nov., a novel species isolated from soil in Jangsu, Korea

(2020) You-Jung Jung et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Pontibacter pudoricolor sp. nov., and Pontibacter russatus sp. nov. radiation-resistant bacteria isolated from soil

(2020) Soohyun Maeng et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Nationwide analysis of Mycobacterium chimaera and Mycobacterium intracellulare isolates: Frequency, clinical importance, and molecular and phenotypic resistance profiles

(2020) Sara Truden et al.   INFECTION GENETICS AND EVOLUTION

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

Seed biopriming with P- and K-solubilizing Enterobacter hormaechei sp. improves the early vegetative growth and the P and K uptake of okra (Abelmoschus esculentus) seedling

(2020) Muhamad Aidilfitri Mohamad Roslan et al.   PLoS One

Diversity analysis of 80,000 wheat accessions reveals consequences and opportunities of selection footprints

(2020) Carolina Sansaloni et al.   Nature Communications

Mycobacterium avium: an overview

(2019) Caroline Busatto et al.   TUBERCULOSIS

15 N fertilizer recovery in different tillage-straw systems on a vertisol in North-West Mexico

(2019) K. Grahmann et al.   SOIL USE AND MANAGEMENT

Systems Biology of Plant-Microbiome Interactions

(2019) Patricia A. Rodriguez et al.   Molecular Plant

Short-Term Nitrogen Fertilization Affects Microbial Community Composition and Nitrogen Mineralization Functions in an Agricultural Soil

(2019) Yang Ouyang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cellulomonas fimi secretomes: In vivo and in silico approaches for the lignocellulose bioconversion

(2018) Stefano Spertino et al.   JOURNAL OF BIOTECHNOLOGY

Measuring Metagenome Diversity and Similarity with Hill Numbers

(2018) Zhanshan Sam Ma et al.   Molecular Ecology Resources

Stenotrophomonas maltophilia

(2018) Shi-qi An et al.   TRENDS IN MICROBIOLOGY

GET_PHYLOMARKERS, a Software Package to Select Optimal Orthologous Clusters for Phylogenomics and Inferring Pan-Genome Phylogenies, Used for a Critical Geno-Taxonomic Revision of the Genus Stenotrophomonas

(2018) Pablo Vinuesa et al.   Frontiers in Microbiology

Tillage intensity and pasture in rotation effectively shape soil microbial communities at a landscape scale

(2018) Cédric Le Guillou et al.   MicrobiologyOpen

The Plant Microbiota: Systems-Level Insights and Perspectives

(2016) Daniel B. Müller et al.   Annual Review of Genetics

16S metagenomics reveals changes in the soil bacterial community driven by soil organic C, N-fertilizer and tillage-crop residue management

(2016) Yosef Chávez-Romero et al.   SOIL & TILLAGE RESEARCH

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data

(2015) Genivaldo Gueiros Z. Silva et al.   BIOINFORMATICS

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Durum wheat (Triticum durum L.) quality and yield as affected by tillage–straw management and nitrogen fertilization practice under furrow-irrigated conditions

(2014) Kathrin Grahmann et al.   FIELD CROPS RESEARCH

Genetic relatedness of Mycobacterium avium-intracellulare complex isolates from patients with pulmonary MAC disease and their residential soils

(2012) K. Fujita et al.   CLINICAL MICROBIOLOGY AND INFECTION

Stenotrophomonas maltophilia: an Emerging Global Opportunistic Pathogen

(2012) J. S. Brooke   CLINICAL MICROBIOLOGY REVIEWS

RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data

(2011) Y. Zhao et al.   BIOINFORMATICS

Crops that feed the world 6. Past successes and future challenges to the role played by maize in global food security

(2011) Bekele Shiferaw et al.   Food Security

Soil biota community structure and abundance under agricultural intensification and extensification

(2010) Maria B. Postma-Blaauw et al.   ECOLOGY

Soil quality as affected by tillage-residue management in a wheat-maize irrigated bed planting system

(2010) Nele Verhulst et al.   PLANT AND SOIL