Identification and characterization of a novel metallo β-lactamase, SZM-1, in Shenzhen Bay, South China

Comprehensive Analysis of Imipenemase (IMP)-Type Metallo-β-Lactamase: A Global Distribution Threatening Asia

(2022) Pisut Pongchaikul et al.   Antibiotics-Basel

Assessment of global health risk of antibiotic resistance genes

(2022) Zhenyan Zhang et al.   Nature Communications

Mechanisms of Action of Carbapenem Resistance

(2022) Caterina Aurilio et al.   Antibiotics-Basel

The Changing Face of the Family Enterobacteriaceae (Order: “Enterobacterales”): New Members, Taxonomic Issues, Geographic Expansion, and New Diseases and Disease Syndromes

(2021) J. Michael Janda et al.   CLINICAL MICROBIOLOGY REVIEWS

Expanded diversity of Asgard archaea and their relationships with eukaryotes

(2021) Yang Liu et al.   NATURE

The urgent need for metallo-β-lactamase inhibitors: an unattended global threat

(2021) Maria F Mojica et al.   LANCET INFECTIOUS DISEASES

Taxonomic classification method for metagenomics based on core protein families with Core-Kaiju

(2020) Anna Tovo et al.   NUCLEIC ACIDS RESEARCH

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

(2019) Rene S. Hendriksen et al.   Nature Communications

MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies

(2019) Dongwan D. Kang et al.   PeerJ

Land use-induced change in trophic state of Shenzhen Bay (South China) over the past half-century

(2019) Hongyu Yan et al.   MARINE POLLUTION BULLETIN

Defining and combating antibiotic resistance from One Health and Global Health perspectives

(2019) Sara Hernando-Amado et al.   Nature Microbiology

GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database

(2019) Pierre-Alain Chaumeil et al.   BIOINFORMATICS

Metagenomic assembly provides a deep insight into the antibiotic resistome alteration induced by drinking water chlorination and its correlations with bacterial host changes

(2019) Shuyu Jia et al.   JOURNAL OF HAZARDOUS MATERIALS

Major New Microbial Groups Expand Diversity and Alter our Understanding of the Tree of Life

(2018) Cindy J. Castelle et al.   CELL

First Report of SHV-148-Type ESBL and CMY-42-Type AmpC β-Lactamase in Klebsiella pneumoniae Clinical Isolates in Tunisia

(2018) Olfa Dziri et al.   Microbial Drug Resistance

The Resistome of Low-Impacted Marine Environments Is Composed by Distant Metallo-β-Lactamases Homologs

(2018) Erica L. Fonseca et al.   Frontiers in Microbiology

PNGM-1, a Novel Subclass B3 Metallo-β-Lactamase from a Deep-Sea Sediment Metagenome

(2018) Kwang Seung Park et al.   Journal of Global Antimicrobial Resistance

A metagenomic analysis framework for characterization of antibiotic resistomes in river environment: Application to an urban river in Beijing

(2018) Haiyang Chen et al.   ENVIRONMENTAL POLLUTION

Carbapenem-resistant Enterobacteriaceae in the community: a scoping review

(2017) Ana M. Kelly et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices

(2016) Dinghua Li et al.   METHODS

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Expanding the Repertoire of Carbapenem-Hydrolyzing Metallo-ß-Lactamases by Functional Metagenomic Analysis of Soil Microbiota

(2016) Dereje D. Gudeta et al.   Frontiers in Microbiology

Metagenomic Assembly Reveals Hosts of Antibiotic Resistance Genes and the Shared Resistome in Pig, Chicken, and Human Feces

(2015) Liping Ma et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Simplified Protocol for Carba NP Test for Enhanced Detection of Carbapenemase Producers Directly from Bacterial Cultures

(2015) Fernando Pasteran et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Characterization of a New Metallo- -Lactamase Gene, blaNDM-1, and a Novel Erythromycin Esterase Gene Carried on a Unique Genetic Structure in Klebsiella pneumoniae Sequence Type 14 from India

(2009) D. Yong et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Metal Content and Localization during Turnover inB. cereusMetallo-β-lactamase

(2008) Leticia I. Llarrull et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY