Measurements of heterogeneity in proteomics analysis of the nanoparticle protein corona across core facilities

Importance of Standardizing Analytical Characterization Methodology for Improved Reliability of the Nanomedicine Literature

(2022) Shahriar Sharifi et al.   Nano-Micro Letters

Nanoscale characterization of the biomolecular corona by cryo-electron microscopy, cryo-electron tomography, and image simulation

(2021) Sara Sheibani et al.   Nature Communications

The File Drawer Problem in Nanomedicine

(2021) Ali Akbar Ashkarran et al.   TRENDS IN BIOTECHNOLOGY

Environmental dimensions of the protein corona

(2021) Korin E. Wheeler et al.   Nature Nanotechnology

The need for robust characterization of nanomaterials for nanomedicine applications

(2021) Morteza Mahmoudi   Nature Communications

Unusual zymogen activation patterns in the protein corona of Ca-zeolites

(2021) Xiaoqiang Shang et al.   Nature Catalysis

Understanding the Lipid and Protein Corona Formation on Different Sized Polymeric Nanoparticles

(2020) Tânia Lima et al.   Scientific Reports

Rapid, deep and precise profiling of the plasma proteome with multi-nanoparticle protein corona

(2020) John E. Blume et al.   Nature Communications

Quantitative Protein Corona Composition and Dynamics on Carbon Nanotubes in Biological Environments

(2020) Rebecca L Pinals et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Mapping and identification of soft corona proteins at nanoparticles and their impact on cellular association

(2020) Hossein Mohammad-Beigi et al.   Nature Communications

Multi-omic measurements of heterogeneity in HeLa cells across laboratories

(2019) Yansheng Liu et al.   NATURE BIOTECHNOLOGY

Non-invasive diagnosis and biomarkers in alcohol-related liver disease

(2019) Christophe Moreno et al.   JOURNAL OF HEPATOLOGY

An Integrated Analysis of Metabolites, Peptides and Inflammation Biomarkers for Assessment of Pre-analytical Variability of Human Plasma

(2019) Zhijun Cao et al.   JOURNAL OF PROTEOME RESEARCH

In-depth human plasma proteome analysis captures tissue proteins and transfer of protein variants across the placenta

(2019) Maria Pernemalm et al.   eLife

On the issue of transparency and reproducibility in nanomedicine

(2019) Hon S. Leong et al.   Nature Nanotechnology

Corona Isolation Method Matters: Capillary Electrophoresis Mass Spectrometry Based Comparison of Protein Corona Compositions Following On-Particle versus In-Solution or In-Gel Digestion

(2019) Klaus Faserl et al.   Nanomaterials

Plasma Proteome Profiling to detect and avoid sample‐related biases in biomarker studies

(2019) Philipp E Geyer et al.   EMBO Molecular Medicine

Stability of the Human Plasma Proteome to Pre-analytical Variability as Assessed by an Aptamer-Based Approach

(2019) Jaclyn R. Daniels et al.   JOURNAL OF PROTEOME RESEARCH

Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data

(2019) Vera Ignjatovic et al.   JOURNAL OF PROTEOME RESEARCH

Plasma/serum proteomics: depletion strategies for reducing high-abundance proteins for biomarker discovery

(2019) Pey Yee Lee et al.   Bioanalysis

Interplay of protein corona and immune cells controls blood residency of liposomes

(2019) Francesca Giulimondi et al.   Nature Communications

Strong impact on plasma protein profiles by precentrifugation delay but not by repeated freeze-thaw cycles, as analyzed using multiplex proximity extension assays

(2018) Qiujin Shen et al.   CLINICAL CHEMISTRY AND LABORATORY MEDICINE

Systematic Evaluation of the Use of Human Plasma and Serum for Mass-Spectrometry-Based Shotgun Proteomics

(2018) Jiayi Lan et al.   JOURNAL OF PROTEOME RESEARCH

Beyond Unpredictability: The Importance of Reproducibility in Understanding the Protein Corona of Nanoparticles

(2018) Sandra Galmarini et al.   BIOCONJUGATE CHEMISTRY

Minimum information reporting in bio–nano experimental literature

(2018) Matthew Faria et al.   Nature Nanotechnology

The Human Plasma Proteome Draft of 2017: Building on the Human Plasma PeptideAtlas from Mass Spectrometry and Complementary Assays

(2017) Jochen M. Schwenk et al.   JOURNAL OF PROTEOME RESEARCH

The Impact of Protein Corona Formation on the Macrophage Cellular Uptake and Biodistribution of Spherical Nucleic Acids

(2017) Alyssa B. Chinen et al.   Small

Biological Identity of Nanoparticles In Vivo : Clinical Implications of the Protein Corona

(2017) Giulio Caracciolo et al.   TRENDS IN BIOTECHNOLOGY

With or without you — Proteomics with or without major plasma/serum proteins

(2016) Elisabetta Gianazza et al.   Journal of Proteomics

Proteomics reveals the effects of sustained weight loss on the human plasma proteome

(2016) Philipp E Geyer et al.   Molecular Systems Biology

Emerging understanding of the protein corona at the nano-bio interfaces

(2016) Morteza Mahmoudi et al.   Nano Today

Plasma Proteome Profiling to Assess Human Health and Disease

(2016) Philipp E. Geyer et al.   Cell Systems

Evaluating the effects of preanalytical variables on the stability of the human plasma proteome

(2015) Maria E. Hassis et al.   ANALYTICAL BIOCHEMISTRY

Multiplexed, Quantitative Workflow for Sensitive Biomarker Discovery in Plasma Yields Novel Candidates for Early Myocardial Injury

(2015) Hasmik Keshishian et al.   MOLECULAR & CELLULAR PROTEOMICS

Crucial role of the protein corona for the specific targeting of nanoparticles

(2015) Morteza Mahmoudi et al.   Nanomedicine

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

(2014)   NATURE BIOTECHNOLOGY

Reproducibility

(2014) Bruce C. Gibb   Nature Chemistry

Differential Roles of the Protein Corona in the Cellular Uptake of Nanoporous Polymer Particles by Monocyte and Macrophage Cell Lines

(2013) Yan Yan et al.   ACS Nano

Interlaboratory comparison of size measurements on nanoparticles using nanoparticle tracking analysis (NTA)

(2013) Patrick Hole et al.   JOURNAL OF NANOPARTICLE RESEARCH

Profiling post-centrifugation delay of serum and plasma with antibody bead arrays

(2013) Ulrika Qundos et al.   Journal of Proteomics

Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS

(2013) Markku Varjosalo et al.   NATURE METHODS

Rapid formation of plasma protein corona critically affects nanoparticle pathophysiology

(2013) Stefan Tenzer et al.   Nature Nanotechnology

Global Stability of Plasma Proteomes for Mass Spectrometry-Based Analyses

(2012) Lisa J. Zimmerman et al.   MOLECULAR & CELLULAR PROTEOMICS

Biomolecular coronas provide the biological identity of nanosized materials

(2012) Marco P. Monopoli et al.   Nature Nanotechnology

More than 100,000 Detectable Peptide Species Elute in Single Shotgun Proteomics Runs but the Majority is Inaccessible to Data-Dependent LC−MS/MS

(2011) Annette Michalski et al.   JOURNAL OF PROTEOME RESEARCH

IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography–mass spectrometry for human plasma proteomics biomarker discovery

(2011) Tujin Shi et al.   METHODS

Depletion of Abundant Plasma Proteins and Limitations of Plasma Proteomics

(2010) Chengjian Tu et al.   JOURNAL OF PROTEOME RESEARCH

Mining the Plasma Proteome for Disease Applications Across Seven Logs of Protein Abundance

(2010) Q. Zhang et al.   JOURNAL OF PROTEOME RESEARCH

Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography−Tandem Mass Spectrometry

(2009) David L. Tabb et al.   JOURNAL OF PROTEOME RESEARCH

The stability of the circulating human proteome to variations in sample collection and handling procedures measured with an aptamer-based proteomics array

(2009) Rachel Ostroff et al.   Journal of Proteomics

A HUPO test sample study reveals common problems in mass spectrometry–based proteomics

(2009) Alexander W Bell et al.   NATURE METHODS

Nanoparticle size and surface properties determine the protein corona with possible implications for biological impacts

(2008) M. Lundqvist et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA