A field guide to endogenous retrovirus regulatory networks

KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences

(2022) Alexandra Iouranova et al.   Mobile DNA

PBRM1 Inactivation Promotes Upregulation of Human Endogenous Retroviruses in a HIF-Dependent Manner

(2022) Mi Zhou et al.   Cancer Immunology Research

Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression

(2022) William Garland et al.   MOLECULAR CELL

Recent Bioinformatic Progress to Identify Epigenetic Changes Associated to Transposable Elements

(2022) Emmanuelle Lerat   Frontiers in Genetics

m 6 A RNA methylation: from mechanisms to therapeutic potential

(2021) P Cody He et al.   EMBO JOURNAL

m6A RNA methylation regulates the fate of endogenous retroviruses

(2021) Tomasz Chelmicki et al.   NATURE

Gv1, a Zinc Finger Gene Controlling Endogenous MLV Expression

(2021) George R Young et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identifying transposable element expression dynamics and heterogeneity during development at the single-cell level with a processing pipeline scTE

(2021) Jiangping He et al.   Nature Communications

Lymphoid-specific helicase in epigenetics, DNA repair and cancer

(2021) Xiangyu Chen et al.   BRITISH JOURNAL OF CANCER

Locus-specific expression of transposable elements in single cells with CELLO-seq

(2021) Rebecca V. Berrens et al.   NATURE BIOTECHNOLOGY

MORC protein family-related signature within human disease and cancer

(2021) Huan Wang et al.   Cell Death & Disease

Morc3 silences endogenous retroviruses by enabling Daxx-mediated histone H3.3 incorporation

(2021) Sophia Groh et al.   Nature Communications

The Lupus Susceptibility Locus Sgp3 Encodes the Suppressor of Endogenous Retrovirus Expression SNERV

(2019) Rebecca S. Treger et al.   IMMUNITY

Single-cell CAS-seq reveals a class of short PIWI-interacting RNAs in human oocytes

(2019) Qiyuan Yang et al.   Nature Communications

Host–transposon interactions: conflict, cooperation, and cooption

(2019) Rachel L Cosby et al.   GENES & DEVELOPMENT

The Gene-Silencing Protein MORC-1 Topologically Entraps DNA and Forms Multimeric Assemblies to Cause DNA Compaction

(2019) HyeongJun Kim et al.   MOLECULAR CELL

ZFP57 regulation of transposable elements and gene expression within and beyond imprinted domains

(2019) Hui Shi et al.   Epigenetics & Chromatin

The HUSH complex cooperates with TRIM28 to repress young retrotransposons and new genes

(2018) Luisa Robbez-Masson et al.   GENOME RESEARCH

HERV Envelope Proteins: Physiological Role and Pathogenic Potential in Cancer and Autoimmunity

(2018) Nicole Grandi et al.   Frontiers in Microbiology

The somatic piRNA pathway controls germline transposition over generations

(2018) Bridlin Barckmann et al.   NUCLEIC ACIDS RESEARCH

The Histone Variant H3.3 in Transcriptional Regulation and Human Disease

(2017) Leilei Shi et al.   JOURNAL OF MOLECULAR BIOLOGY

Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators

(2017) Nian Liu et al.   NATURE

Hyperactivation of HUSH complex function by Charcot–Marie–Tooth disease mutation in MORC2

(2017) Iva A Tchasovnikarova et al.   NATURE GENETICS

The Role of KRAB-ZFPs in Transposable Element Repression and Mammalian Evolution

(2017) Peng Yang et al.   TRENDS IN GENETICS

Transposable Elements and Their KRAB-ZFP Controllers Regulate Gene Expression in Adult Tissues

(2016) Gabriela Ecco et al.   DEVELOPMENTAL CELL

Dynamic Transcription of Distinct Classes of Endogenous Retroviral Elements Marks Specific Populations of Early Human Embryonic Cells

(2015) Jonathan Göke et al.   Cell Stem Cell

Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells

(2015) Simon J. Elsässer et al.   NATURE

C2H2 zinc finger proteins greatly expand the human regulatory lexicon

(2015) Hamed S Najafabadi et al.   NATURE BIOTECHNOLOGY

The ATP binding site of the chromatin remodeling homolog Lsh is required for nucleosome density and de novo DNA methylation at repeat sequences

(2015) Jianke Ren et al.   NUCLEIC ACIDS RESEARCH

Epigenetic silencing by the HUSH complex mediates position-effect variegation in human cells

(2015) I. A. Tchasovnikarova et al.   SCIENCE

Interplay of TRIM28 and DNA methylation in controlling human endogenous retroelements

(2014) Priscilla Turelli et al.   GENOME RESEARCH

MORC1 represses transposable elements in the mouse male germline

(2014) William A. Pastor et al.   Nature Communications

Zfp819, a novel KRAB-zinc finger protein, interacts with KAP1 and functions in genomic integrity maintenance of mouse embryonic stem cells

(2013) Xiaoying Tan et al.   Stem Cell Research

Expression of endogenous retroviruses is negatively regulated by the pluripotency marker Rex1/Zfp42

(2012) D. Guallar et al.   NUCLEIC ACIDS RESEARCH

Interaction Profiling Identifies the Human Nuclear Exosome Targeting Complex

(2011) Michal Lubas et al.   MOLECULAR CELL

KAP1 controls endogenous retroviruses in embryonic stem cells

(2010) Helen M. Rowe et al.   NATURE

Embryonic stem cells use ZFP809 to silence retroviral DNAs

(2009) Daniel Wolf et al.   NATURE

Effects of Retroviruses on Host Genome Function

(2008) Patric Jern et al.   Annual Review of Genetics

A piRNA Pathway Primed by Individual Transposons Is Linked to De Novo DNA Methylation in Mice

(2008) Alexei A. Aravin et al.   MOLECULAR CELL