Effects of climatic and edaphic conditions on structuring patterns of soil nematode communities in Japanese cedar (Cryptomeria japonica) plantations

Increase in rainfall intensity promotes soil nematode diversity but offset by nitrogen addition in a temperate grassland

(2022) Shuyan Cui et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Shift from morphological to recent advanced molecular approaches for the identification of nematodes

(2022) Rawhat Un Nisa et al.   GENOMICS

Agricultural habitats are dominated by rapidly evolving nematodes revealed through phylogenetic comparative methods

(2021) Xin Gong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Spruce girdling decreases abundance of fungivorous soil nematodes in a boreal forest

(2021) Alexey A. Kudrin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Development and application of a DNA metabarcoding method for comprehensive analysis of soil nematode communities

(2021) Masanori Kawanobe et al.   APPLIED SOIL ECOLOGY

Towards revealing the global diversity and community assembly of soil eukaryotes

(2021) Farzad Aslani et al.   ECOLOGY LETTERS

High-throughput sequencing and conventional morphotyping show different soil nematode assemblages but similar community responses to altitudinal gradients on Mt. Ibuki, Japan

(2021) Yudai Kitagami et al.   PEDOBIOLOGIA

Using high-throughput sequencing quantitatively to investigate soil nematode community composition in a steppe-forest ecotone

(2020) Xiao-Fang Du et al.   APPLIED SOIL ECOLOGY

Microbial community size is a potential predictor of nematode functional group in limed grasslands

(2020) Roy Neilson et al.   APPLIED SOIL ECOLOGY

Effects of microhabitats and soil conditions on structuring patterns of nematode communities in Japanese cedar (Cryptomeria japonica) plantation forests under temperate climate conditions

(2020) Yudai Kitagami et al.   SOIL BIOLOGY & BIOCHEMISTRY

Variable ITS-copy number at different developmental stages of Meloidogyne hapla and M. chitwoodi

(2019) Everaldo Antônio Lopes et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Latitudinal variation in soil nematode communities under climate warming‐related range‐expanding and native plants

(2019) Rutger A. Wilschut et al.   GLOBAL CHANGE BIOLOGY

The impact of dispersal, plant genotype and nematodes on arbuscular mycorrhizal fungal colonization

(2019) Pil U. Rasmussen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil nematode abundance and functional group composition at a global scale

(2019) Johan van den Hoogen et al.   NATURE

Latitudinal and altitudinal patterns of soil nematode communities under tallow tree (Triadica sebifera) in China

(2019) Jia Liu et al.   PLANT ECOLOGY

Challenges and Opportunities for Soil Biodiversity in the Anthropocene

(2019) Stefan Geisen et al.   CURRENT BIOLOGY

Spatial ecology of soil nematodes: Perspectives from global to micro scales

(2019) Ting Liu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Meiofaunal diversity in the Atlantic Forest soil: A quest for nematodes in a native reserve using eukaryotic metabarcoding analysis

(2019) Carla Aristonara Müller et al.   FOREST ECOLOGY AND MANAGEMENT

Temperature changes affect multi-trophic interactions among pines, mycorrhizal fungi, and soil nematodes in a microcosm experiment

(2019) Yudai Kitagami et al.   PEDOBIOLOGIA

Structure and function of the global topsoil microbiome

(2018) Mohammad Bahram et al.   NATURE

Pristionchus nematodes occur frequently in diverse rotting vegetal substrates and are not exclusively necromenic, while Panagrellus redivivoides is found specifically in rotting fruits

(2018) Marie-Anne Félix et al.   PLoS One

Long-term nitrogen addition shifts the soil nematode community to bacterivore-dominated and reduces its ecological maturity in a subalpine forest

(2018) E. Ashley Shaw et al.   SOIL BIOLOGY & BIOCHEMISTRY

Vulnerability of boreal indicators (ground-dwelling beetles, understory plants and ectomycorrhizal fungi) to severe forest soil disturbance

(2017) J.M. Kranabetter et al.   FOREST ECOLOGY AND MANAGEMENT

Do tropical rain forest soils have greater nematode diversity than High Arctic tundra? A metagenetic comparison of Malaysia and Svalbard

(2016) Dorsaf Kerfahi et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

A Weibull model of the impact of thinning and a typhoon event on the stand structure of Cryptomeria japonica in Central Taiwan over 100 years

(2016) Ching-Peng Cheng et al.   Journal of Forest Research

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Long-term effects on soil nematode community structure in spruce forests of removing or not removing fallen trees after a windstorm

(2015) Marek Renčo et al.   FOREST ECOLOGY AND MANAGEMENT

Global-scale patterns of assemblage structure of soil nematodes in relation to climate and ecosystem properties

(2014) Uffe N. Nielsen et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Belowground biodiversity and ecosystem functioning

(2014) Richard D. Bardgett et al.   NATURE

High-throughput amplicon sequencing of rRNA genes requires a copy number correction to accurately reflect the effects of management practices on soil nematode community structure

(2013) B. J. Darby et al.   MOLECULAR ECOLOGY

Tree species diversity versus tree species identity: Driving forces in structuring forest food webs as indicated by soil nematodes

(2013) Simone Cesarz et al.   SOIL BIOLOGY & BIOCHEMISTRY

Tylaphelenchus jiaae n. sp. and Aphelenchoides varicaudatus (Nematoda: Aphelenchoidinae) from Simao pine in Yunnan Province, China

(2012) Ren-E Huang et al.   NEMATOLOGY

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

(2012) Laure Guillou et al.   NUCLEIC ACIDS RESEARCH

Early-stage impacts of sika deer on structure and function of the soil microbial food webs in a temperate forest: A large-scale experiment

(2010) Shigeru Niwa et al.   FOREST ECOLOGY AND MANAGEMENT

Macroecological patterns in soil communities

(2010) Thibaud Decaëns   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Species and genera of soil nematodes in forest ecosystems of the Vihorlat Protected Landscape Area, Slovakia

(2010) L. Háněl et al.   HELMINTHOLOGIA

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Ecometagenetics confirm high tropical rainforest nematode diversity

(2010) DOROTA L. PORAZINSKA et al.   MOLECULAR ECOLOGY

Effects of a one-year rainfall manipulation on soil nematode abundances and community composition

(2010) William J. Landesman et al.   PEDOBIOLOGIA

The Enigma of Soil Animal Species Diversity Revisited: The Role of Small-Scale Heterogeneity

(2010) Uffe N. Nielsen et al.   PLoS One

Reproducibility of read numbers in high-throughput sequencing analysis of nematode community composition and structure

(2009) DOROTA L. PORAZINSKA et al.   Molecular Ecology Resources

Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity

(2009) DOROTA L. PORAZINSKA et al.   Molecular Ecology Resources