Distribution of extracellular amino acids and their potential functions in microbial cross-feeding in anaerobic digestion systems

Microbes trading electricity in consortia of environmental and biotechnological significance

(2021) Amelia-Elena Rotaru et al.   CURRENT OPINION IN BIOTECHNOLOGY

Drawing up a collaborative contract: Amino acid cross‐feeding between interspecies bacterial pairs

(2021) Erin E. Kelly et al.   BIOTECHNOLOGY AND BIOENGINEERING

Current understanding and perspectives in anaerobic digestion based on genome-resolved metagenomic approaches

(2021) Na-Kyung Kim et al.   BIORESOURCE TECHNOLOGY

Deciphering the impacts of composition of extracellular polymeric substances on sludge dewaterability: An often overlooked role of amino acids

(2021) Keke Xiao et al.   CHEMOSPHERE

New insights into the r/K selection theory achieved in methanogenic systems through continuous-flow and sequencing batch operational modes

(2021) Qiannan Guo et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Energy Availability Determines Strategy of Microbial Amino Acid Synthesis in Volatile Fatty Acid–Fed Anaerobic Methanogenic Chemostats

(2021) Jian Yao et al.   Frontiers in Microbiology

Temporary addition of carbon fibers facilitates methanogenic degradation of ethanol during anaerobic treatment

(2020) Jin Du et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Autotrophic nitrogen removal and potential microbial interactions in anammox systems with different ammonia and organic carbon concentrations

(2020) Tianqi Zhang et al.   Journal of Water Process Engineering

Microbial physiology and interactions in anammox systems with the intermittent addition of organic carbons

(2020) Tianqi Zhang et al.   BIORESOURCE TECHNOLOGY

Recent advances in methanogenesis through direct interspecies electron transfer via conductive materials: A molecular microbiological perspective

(2020) Hyun-Jin Kang et al.   BIORESOURCE TECHNOLOGY

Expanding the anaerobic digestion map: A review of intermediates in the digestion of food waste

(2020) Sarah M. Hunter et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Effects of thermal hydrolysis on the metabolism of amino acids in sewage sludge in anaerobic digestion

(2019) Sisi Chen et al.   WASTE MANAGEMENT

Advances in direct interspecies electron transfer and conductive materials: Electron flux, organic degradation and microbial interaction

(2019) Qidong Yin et al.   BIOTECHNOLOGY ADVANCES

Exploring the effects of operational mode and microbial interactions on bacterial community assembly in a one-stage partial-nitritation anammox reactor using integrated multi-omics

(2019) Yulin Wang et al.   Microbiome

Protein hydrolysis and fermentation under methanogenic and acidifying conditions

(2019) Thu Hang Duong et al.   Biotechnology for Biofuels

Importance of hydrogenotrophic, aceticlastic and methylotrophic methanogenesis for methane production in terrestrial, aquatic and other anoxic environments: A mini review

(2019) Ralf CONRAD   PEDOSPHERE

The social network of microorganisms — how auxotrophies shape complex communities

(2018) Karsten Zengler et al.   NATURE REVIEWS MICROBIOLOGY

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

(2018) Morgan N. Price et al.   PLoS Genetics

Biosynthesis of food constituents: Amino acids: 2. The alanine-valine-leucine, serine-cysteine-glycine, and aromatic and heterocyclic amino acids groups – a review

(2018) J. Velíšek et al.   CZECH JOURNAL OF FOOD SCIENCES

Methane Production and Conductive Materials: A Critical Review

(2018) Gilberto Martins et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Networks of energetic and metabolic interactions define dynamics in microbial communities

(2015) Mallory Embree et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of extracellular polymeric substance in determining the high aggregation ability of anammox sludge

(2015) Xiaolin Hou et al.   WATER RESEARCH

Metabolic cross-feeding via intercellular nanotubes among bacteria

(2015) Samay Pande et al.   Nature Communications

An Economic Framework of Microbial Trade

(2015) Joshua Tasoff et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Evolution of microbial markets

(2014) G. D. A. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nutrient cross-feeding in the microbial world

(2014) Erica C. Seth et al.   Frontiers in Microbiology

Flexibility of Syntrophic Enzyme Systems in Desulfovibrio Species Ensures Their Adaptation Capability to Environmental Changes

(2013) B. Meyer et al.   JOURNAL OF BACTERIOLOGY

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation

(2010) Jessica R. Sieber et al.   Annual Review of Microbiology

Extracellular polymeric substances (EPS) of microbial aggregates in biological wastewater treatment systems: A review

(2010) Guo-Ping Sheng et al.   BIOTECHNOLOGY ADVANCES

Rules of Engagement: Interspecies Interactions that Regulate Microbial Communities

(2008) Ainslie E.F. Little et al.   Annual Review of Microbiology

Methanogenic archaea: ecologically relevant differences in energy conservation

(2008) Rudolf K. Thauer et al.   NATURE REVIEWS MICROBIOLOGY