Changes in the DNA methylation pattern of the host male gametophyte of viroid-infected cucumber plants

A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis

(2016) Ruiqiang Ye et al.   MOLECULAR CELL

Epigenetic Mechanisms: An Emerging Player in Plant-Microbe Interactions

(2016) Qian-Hao Zhu et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

A pathogenic long noncoding RNA redesigns the epigenetic landscape of the infected cells by subverting host Histone Deacetylase 6 activity

(2016) Mayte Castellano et al.   NEW PHYTOLOGIST

RNA-directed DNA methylation efficiency depends on trigger and target sequence identity

(2016) Athanasios Dalakouras et al.   PLANT JOURNAL

Dicer-independent RNA-directed DNA methylation in Arabidopsis

(2015) Dong-Lei Yang et al.   CELL RESEARCH

Small RNA Derived from the Virulence Modulating Region of thePotato spindle tuber viroidSilencescallose synthaseGenes of Tomato Plants

(2015) Charith Raj Adkar-Purushothama et al.   PLANT CELL

Alterations in host DNA methylation in response to constitutive expression ofHop stunt viroidRNA inNicotiana benthamianaplants

(2015) M. Castellano et al.   PLANT PATHOLOGY

HISTONE DEACETYLASE6 Controls Gene Expression Patterning and DNA Methylation-Independent Euchromatic Silencing

(2015) Emilija Hristova et al.   PLANT PHYSIOLOGY

Viral factors involved in plant pathogenesis

(2015) Juan Antonio García et al.   Current Opinion in Virology

A Two-Step Process for Epigenetic Inheritance in Arabidopsis

(2014) Todd Blevins et al.   MOLECULAR CELL

Distribution of Potato spindle tuber viroid in Reproductive Organs of Petunia During Its Developmental Stages

(2014) Yosuke Matsushita et al.   PHYTOPATHOLOGY

Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs inArabidopsis

(2014) Mengji Cao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In Nicotiana species, an artificial microRNA corresponding to the virulence modulating region of Potato spindle tuber viroid directs RNA silencing of a soluble inorganic pyrophosphatase gene and the development of abnormal phenotypes

(2014) Andrew L. Eamens et al.   VIROLOGY

Structure and function of long noncoding RNAs in epigenetic regulation

(2013) Tim R Mercer et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Viroids: a light in the darkness of thelncRNA-directed regulatory networks in plants

(2013) Gustavo Gómez et al.   NEW PHYTOLOGIST

Geminivirus Rep protein interferes with the plant DNA methylation machinery and suppresses transcriptional gene silencing

(2013) Edgar Rodríguez-Negrete et al.   NEW PHYTOLOGIST

A pathogenic non-coding RNA induces changes in dynamic DNA methylation of ribosomal RNA genes in host plants

(2013) German Martinez et al.   NUCLEIC ACIDS RESEARCH

A Versatile Method to Design Stem-Loop Primer-Based Quantitative PCR Assays for Detecting Small Regulatory RNA Molecules

(2013) Zsolt Czimmerer et al.   PLoS One

Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense

(2013) A. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Viroids: How to infect a host and cause disease without encoding proteins

(2012) Beatriz Navarro et al.   BIOCHIMIE

Developmental relaxation of transposable element silencing in plants: functional or byproduct?

(2012) Germán Martínez et al.   CURRENT OPINION IN PLANT BIOLOGY

Stress-Induced Chromatin Changes: A Critical View on Their Heritability

(2012) A. Pecinka et al.   PLANT AND CELL PHYSIOLOGY

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nucleolar chromatin organization at different activities of soybean root meristematic cell nucleoli

(2012) Dariusz Stępiński   PROTOPLASMA

Gene Expression and Stress Response Mediated by the Epigenetic Regulation of a Transposable Element Small RNA

(2012) Andrea D. McCue et al.   PLoS Genetics

RNA-Seq improves annotation of protein-coding genes in the cucumber genome

(2011) Zhen Li et al.   BMC GENOMICS

Interleukin-6 expression was regulated by epigenetic mechanisms in response to influenza virus infection or dsRNA treatment

(2011) Bikui Tang et al.   MOLECULAR IMMUNOLOGY

Genetic and Epigenetic Effects of Plant–Pathogen Interactions: An Evolutionary Perspective

(2011) Alex Boyko et al.   Molecular Plant

HDA6 Directly Interacts with DNA Methyltransferase MET1 and Maintains Transposable Element Silencing in Arabidopsis

(2011) X. Liu et al.   PLANT PHYSIOLOGY

The RNA Silencing Enzyme RNA Polymerase V Is Required for Plant Immunity

(2011) Ana López et al.   PLoS Genetics

Viral Small Interfering RNAs Target Host Genes to Mediate Disease Symptoms in Plants

(2011) Neil A. Smith et al.   PLoS Pathogens

A Viral Satellite RNA Induces Yellow Symptoms on Tobacco by Targeting a Gene Involved in Chlorophyll Biosynthesis using the RNA Silencing Machinery

(2011) Hanako Shimura et al.   PLoS Pathogens

Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation

(2010) K. W. Earley et al.   GENES & DEVELOPMENT

Epigenetic control of plant immunity

(2010) MARÍA E. ALVAREZ et al.   MOLECULAR PLANT PATHOLOGY

High-throughput sequencing ofHop stunt viroid-derived small RNAs from cucumber leaves and phloem

(2010) GERMAN MARTINEZ et al.   MOLECULAR PLANT PATHOLOGY

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

Epigenetic Regulation of Repetitive Elements Is Attenuated by Prolonged Heat Stress inArabidopsis

(2010) Ales Pecinka et al.   PLANT CELL

Transgenerational Adaptation of Arabidopsis to Stress Requires DNA Methylation and the Function of Dicer-Like Proteins

(2010) Alex Boyko et al.   PLoS One

The Biology of Viroid-Host Interactions

(2009) Biao Ding   Annual Review of Phytopathology

Roles of Plant Small RNAs in Biotic Stress Responses

(2009) Virginia Ruiz-Ferrer et al.   Annual Review of Plant Biology

Interplay between viroid-induced pathogenesis and RNA silencing pathways

(2009) Gustavo Gómez et al.   TRENDS IN PLANT SCIENCE

Viroid-Induced Symptoms in Nicotiana benthamiana Plants Are Dependent on RDR6 Activity

(2008) G. Gomez et al.   PLANT PHYSIOLOGY