A pathogenic long noncoding RNA redesigns the epigenetic landscape of the infected cells by subverting host Histone Deacetylase 6 activity

Viroids, infectious long non-coding RNAs with autonomous replication

(2016) Selma Gago-Zachert   VIRUS RESEARCH

Infectious long non-coding RNAs

(2015) Konstantina Katsarou et al.   BIOCHIMIE

Small RNA Derived from the Virulence Modulating Region of thePotato spindle tuber viroidSilencescallose synthaseGenes of Tomato Plants

(2015) Charith Raj Adkar-Purushothama et al.   PLANT CELL

Alterations in host DNA methylation in response to constitutive expression ofHop stunt viroidRNA inNicotiana benthamianaplants

(2015) M. Castellano et al.   PLANT PATHOLOGY

HISTONE DEACETYLASE6 Controls Gene Expression Patterning and DNA Methylation-Independent Euchromatic Silencing

(2015) Emilija Hristova et al.   PLANT PHYSIOLOGY

Replicating Potato spindle tuber viroid mediatesde novomethylation of an intronic viroid sequence but no cleavage of the corresponding pre-mRNA

(2015) Athanasios Dalakouras et al.   RNA Biology

Long Non-coding RNAs and Their Biological Roles in Plants

(2015) Xue Liu et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Viroids: Survivors from the RNA World?

(2014) Ricardo Flores et al.   Annual Review of Microbiology

In Nicotiana species, an artificial microRNA corresponding to the virulence modulating region of Potato spindle tuber viroid directs RNA silencing of a soluble inorganic pyrophosphatase gene and the development of abnormal phenotypes

(2014) Andrew L. Eamens et al.   VIROLOGY

What has been happening with viroids?

(2014) Peter Palukaitis   VIRUS GENES

Viroids: a light in the darkness of thelncRNA-directed regulatory networks in plants

(2013) Gustavo Gómez et al.   NEW PHYTOLOGIST

Geminivirus Rep protein interferes with the plant DNA methylation machinery and suppresses transcriptional gene silencing

(2013) Edgar Rodríguez-Negrete et al.   NEW PHYTOLOGIST

A pathogenic non-coding RNA induces changes in dynamic DNA methylation of ribosomal RNA genes in host plants

(2013) German Martinez et al.   NUCLEIC ACIDS RESEARCH

Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense

(2013) A. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Revisiting RNA-directed DNA methylation

(2013) Athanasios Dalakouras et al.   RNA Biology

Viroids: How to infect a host and cause disease without encoding proteins

(2012) Beatriz Navarro et al.   BIOCHIMIE

Tomato RNA polymerase II interacts with the rod-like conformation of the left terminal domain of the potato spindle tuber viroid positive RNA genome

(2012) T. Bojic et al.   JOURNAL OF GENERAL VIROLOGY

Involvement of the Chloroplastic Isoform of tRNA Ligase in the Replication of Viroids Belonging to the Family Avsunviroidae

(2012) M.-A. Nohales et al.   JOURNAL OF VIROLOGY

Small RNAs containing the pathogenic determinant of a chloroplast-replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing

(2012) Beatriz Navarro et al.   PLANT JOURNAL

C2-mediated decrease in DNA methylation, accumulation of siRNAs, and increase in expression for genes involved in defense pathways in plants infected with beet severe curly top virus

(2012) Li-Ping Yang et al.   PLANT JOURNAL

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Viroid RNA redirects host DNA ligase 1 to act as an RNA ligase

(2012) M.-A. Nohales et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HDA6 Directly Interacts with DNA Methyltransferase MET1 and Maintains Transposable Element Silencing in Arabidopsis

(2011) X. Liu et al.   PLANT PHYSIOLOGY

Arabidopsis HDA6 Regulates Locus-Directed Heterochromatin Silencing in Cooperation with MET1

(2011) Taiko Kim To et al.   PLoS Genetics

Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation

(2010) K. W. Earley et al.   GENES & DEVELOPMENT

Viroids: self-replicating, mobile, and fast-evolving noncoding regulatory RNAs

(2010) Biao Ding   Wiley Interdisciplinary Reviews-RNA

Interplay between viroid-induced pathogenesis and RNA silencing pathways

(2009) Gustavo Gómez et al.   TRENDS IN PLANT SCIENCE

Viroid Pathogenicity: One Process, Many Faces

(2009) Robert Owens et al.   Viruses-Basel

Viral Genome Methylation as an Epigenetic Defense against Geminiviruses

(2008) P. Raja et al.   JOURNAL OF VIROLOGY

Viroid-Induced Symptoms in Nicotiana benthamiana Plants Are Dependent on RDR6 Activity

(2008) G. Gomez et al.   PLANT PHYSIOLOGY