Genome Analysis ofPseudoloma neurophilia: A Microsporidian Parasite of Zebrafish (Danio rerio)

The genome of an Encephalitozoon cuniculi type III strain reveals insights into the genetic diversity and mode of reproduction of a ubiquitous vertebrate pathogen

(2016) A Pelin et al.   HEREDITY

Microsporidia: Eukaryotic Intracellular Parasites Shaped by Gene Loss and Horizontal Gene Transfers

(2015) Nicolas Corradi   Annual Review of Microbiology

The common neural parasite Pseudoloma neurophilia is associated with altered startle response habituation in adult zebrafish (Danio rerio): Implications for the zebrafish as a model organism

(2015) Sean Spagnoli et al.   BEHAVIOURAL BRAIN RESEARCH

Transcriptomic profiling of host-parasite interactions in the microsporidian Trachipleistophora hominis

(2015) Andrew K. Watson et al.   BMC GENOMICS

Genome analyses suggest the presence of polyploidy and recent human-driven expansions in eight global populations of the honeybee pathogenNosema ceranae

(2015) Adrian Pelin et al.   ENVIRONMENTAL MICROBIOLOGY

Genetic modification of the diarrhoeal pathogen Cryptosporidium parvum

(2015) Sumiti Vinayak et al.   NATURE

Contrasting host–pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoes

(2015) Christopher A. Desjardins et al.   Nature Communications

ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation

(2014) A. D. McCue et al.   EMBO JOURNAL

Microsporidian Genomes Harbor a Diverse Array of Transposable Elements that Demonstrate an Ancestry of Horizontal Exchange with Metazoans

(2014) Nicolas Parisot et al.   Genome Biology and Evolution

Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia

(2014) Sergey A. Karpov et al.   Frontiers in Microbiology

Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation

(2013) Guoqing Pan et al.   BMC GENOMICS

Shared Signatures of Parasitism and Phylogenomics Unite Cryptomycota and Microsporidia

(2013) Timothy Y. James et al.   CURRENT BIOLOGY

Extremely Reduced Levels of Heterozygosity in the Vertebrate Pathogen Encephalitozoon cuniculi

(2013) Mohammed Selman et al.   EUKARYOTIC CELL

Reduction and Expansion in Microsporidian Genome Evolution: New Insights from Comparative Genomics

(2013) Sirintra Nakjang et al.   Genome Biology and Evolution

Documented and Potential Research Impacts of Subclinical Diseases in Zebrafish

(2013) M. L. Kent et al.   ILAR JOURNAL

Microsporidiosis in Zebrafish Research Facilities

(2013) J. L. Sanders et al.   ILAR JOURNAL

Verification of Intraovum Transmission of a Microsporidium of Vertebrates: Pseudoloma neurophilia Infecting the Zebrafish, Danio rerio

(2013) Justin L. Sanders et al.   PLoS One

The Genome of Spraguea lophii and the Basis of Host-Microsporidian Interactions

(2013) Scott E. Campbell et al.   PLoS Genetics

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Microsporidian Infection in a Free-Living Marine Nematode

(2012) A. M. Ardila-Garcia et al.   EUKARYOTIC CELL

Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth

(2012) C. A. Cuomo et al.   GENOME RESEARCH

Microsporidia as emerging pathogens and the implication for public health: A 10-year study on HIV-positive and -negative patients

(2012) Maria Luísa Lobo et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Genome Sequencing and Mapping Reveal Loss of Heterozygosity as a Mechanism for Rapid Adaptation in the Vegetable Pathogen Phytophthora capsici

(2012) Kurt H. Lamour et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Nosema ceranae(Microsporidia), a controversial 21st century honey bee pathogen

(2012) Mariano Higes et al.   Environmental Microbiology Reports

Annotation of microsporidian genomes using transcriptional signals

(2012) Eric Peyretaillade et al.   Nature Communications

The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution

(2012) Eva Heinz et al.   PLoS Pathogens

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

The intriguing nature of microsporidian genomes

(2011) N. Corradi et al.   Briefings in Functional Genomics

RNA Interference in Fungi: Pathways, Functions, and Applications

(2011) Yunkun Dang et al.   EUKARYOTIC CELL

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

(2011) Robert Kofler et al.   PLoS One

Detection of microsporidia in drinking water, wastewater and recreational rivers

(2011) Fernando Izquierdo et al.   WATER RESEARCH

Effective Gene Silencing in a Microsporidian Parasite Associated with Honeybee (Apis mellifera) Colony Declines

(2010) N. Paldi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Brief History of the Status of Transposable Elements: From Junk DNA to Major Players in Evolution

(2010) C. Biemont   GENETICS

The Reduced Genome of the Parasitic Microsporidian Enterocytozoon bieneusi Lacks Genes for Core Carbon Metabolism

(2010) Patrick J. Keeling et al.   Genome Biology and Evolution

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis

(2010) Nicolas Corradi et al.   Nature Communications

The Biogenesis and Function of PIWI Proteins and piRNAs: Progress and Prospect

(2009) Travis Thomson et al.   Annual Review of Cell and Developmental Biology

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Genomic Survey of the Non-Cultivatable Opportunistic Human Pathogen, Enterocytozoon bieneusi

(2009) Donna E. Akiyoshi et al.   PLoS Pathogens

Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions

(2009) Nicolas Corradi et al.   GENOME BIOLOGY

Loss of heterozygosity in commensal isolates of the asexual diploid yeast Candida albicans

(2008) Dorothée Diogo et al.   FUNGAL GENETICS AND BIOLOGY

The evolution of RNAi as a defence against viruses and transposable elements

(2008) D. J Obbard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

How to usefully compare homologous plant genes and chromosomes as DNA sequences

(2008) Eric Lyons et al.   PLANT JOURNAL

The Argonaute protein family

(2008) Julia Höck et al.   GENOME BIOLOGY