Graph Triple-Attention Network for Disease-Related LncRNA Prediction

Attentional multi-level representation encoding based on convolutional and variance autoencoders for lncRNA–disease association prediction

(2020) Nan Sheng et al.   BRIEFINGS IN BIOINFORMATICS

A Novel Graph Attention Adversarial Network for Predicting Disease-related Associations

(2020) Jinli Zhang et al.   METHODS

A comprehensive survey on computational methods of non-coding RNA and disease association prediction

(2020) Xiujuan Lei et al.   BRIEFINGS IN BIOINFORMATICS

A Probabilistic Matrix Factorization Method for Identifying lncRNA-disease Associations

(2019) Zhanwei Xuan et al.   Genes

Prediction of lncRNA-disease associations by integrating diverse heterogeneous information sources with RWR algorithm and positive pointwise mutual information

(2019) Xiao-Nan Fan et al.   BMC BIOINFORMATICS

Dual Convolutional Neural Networks With Attention Mechanisms Based Method for Predicting Disease-Related lncRNA Genes

(2019) Ping Xuan et al.   Frontiers in Genetics

A novel collaborative filtering model for LncRNA-disease association prediction based on the Naïve Bayesian classifier

(2019) Jingwen Yu et al.   BMC BIOINFORMATICS

DNILMF-LDA: Prediction of lncRNA-Disease Associations by Dual-Network Integrated Logistic Matrix Factorization and Bayesian Optimization

(2019) Yan Li et al.   Genes

Graph Convolutional Network and Convolutional Neural Network Based Method for Predicting lncRNA-Disease Associations

(2019) Xuan et al.   Cells

HeteroDualNet: A Dual Convolutional Neural Network With Heterogeneous Layers for Drug-Disease Association Prediction via Chou’s Five-Step Rule

(2019) Ping Xuan et al.   Frontiers in Pharmacology

A novel target convergence set based random walk with restart for prediction of potential LncRNA-disease associations

(2019) Jiechen Li et al.   BMC BIOINFORMATICS

Prediction of lncRNA–disease associations based on inductive matrix completion

(2018) Chengqian Lu et al.   BIOINFORMATICS

A Novel Method for LncRNA-Disease Association Prediction Based on an lncRNA-disease Association Network

(2018) pengyao ping et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Construction of a specific SVM classifier and identification of molecular markers for lung adenocarcinoma based on lncRNA-miRNA-mRNA network

(2018) Jingming Zhao et al.   OncoTargets and Therapy

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

HMDD v3.0: a database for experimentally supported human microRNA–disease associations

(2018) Zhou Huang et al.   NUCLEIC ACIDS RESEARCH

Global network random walk for predicting potential human lncRNA-disease associations

(2017) Changlong Gu et al.   Scientific Reports

The Role of MicroRNA and LncRNA–MicroRNA Interactions in Regulating Ischemic Heart Disease

(2016) Na Li et al.   JOURNAL OF CARDIOVASCULAR PHARMACOLOGY AND THERAPEUTICS

Computational Approaches for Functional Prediction and Characterisation of Long Noncoding RNAs

(2016) Bethany Signal et al.   TRENDS IN GENETICS

ILNCSIM: improved lncRNA functional similarity calculation model

(2016) Yu-An Huang et al.   Oncotarget

FMLNCSIM: fuzzy measure-based lncRNA functional similarity calculation model

(2016) Xing Chen et al.   Oncotarget

IRWRLDA: improved random walk with restart for lncRNA-disease association prediction

(2016) Xing Chen et al.   Oncotarget

Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers

(2015) Shangwei Ning et al.   NUCLEIC ACIDS RESEARCH

Predicting lncRNA-disease associations and constructing lncRNA functional similarity network based on the information of miRNA

(2015) Xing Chen   Scientific Reports

KATZLDA: KATZ measure for the lncRNA-disease association prediction

(2015) Xing Chen   Scientific Reports

Constructing lncRNA functional similarity network based on lncRNA-disease associations and disease semantic similarity

(2015) Xing Chen et al.   Scientific Reports

The Precision-Recall Plot Is More Informative than the ROC Plot When Evaluating Binary Classifiers on Imbalanced Datasets

(2015) Takaya Saito et al.   PLoS One

LncRNA: A link between RNA and cancer

(2014) Guodong Yang et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Integrated analysis of long non-coding RNAs and mRNA expression profiles reveals the potential role of lncRNAs in gastric cancer pathogenesis

(2014) XIAO-CONG LIN et al.   INTERNATIONAL JOURNAL OF ONCOLOGY

A Computational Framework to Infer Human Disease-Associated Long Noncoding RNAs

(2014) Ming-Xi Liu et al.   PLoS One

A bioinformatics method for predicting long noncoding RNAs associated with vascular disease

(2014) JianWei Li et al.   Science China-Life Sciences

Novel human lncRNA–disease association inference based on lncRNA expression profiles

(2013) Xing Chen et al.   BIOINFORMATICS

Cell cycle regulation by long non-coding RNAs

(2013) Masatoshi Kitagawa et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Long Non-Coding RNAs and Complex Human Diseases

(2013) Jing Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

(2013) Jun-Hao Li et al.   NUCLEIC ACIDS RESEARCH

Genome-wide analysis of long noncoding RNA stability

(2012) M. B. Clark et al.   GENOME RESEARCH

LncRNADisease: a database for long-non-coding RNA-associated diseases

(2012) Geng Chen et al.   NUCLEIC ACIDS RESEARCH

Non-coding RNAs in human disease

(2011) Manel Esteller   NATURE REVIEWS GENETICS

Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases

(2010) Dong Wang et al.   BIOINFORMATICS

Long non-coding RNAs: insights into functions

(2009) Tim R. Mercer et al.   NATURE REVIEWS GENETICS