A natural uORF variant confers phosphorus acquisition diversity in soybean

A VIT‐like transporter facilitates iron transport into nodule symbiosomes for nitrogen fixation in soybean

(2020) Sheng Liu et al.   NEW PHYTOLOGIST

Systematic analysis of 1,298 RNA‐Seq samples and construction of a comprehensive soybean ( Glycine max ) expression atlas

(2020) Fabricio Brum Machado et al.   PLANT JOURNAL

Tightening the Phosphorus Cycle through Phosphorus-Efficient Crop Genotypes

(2020) Wen-Feng Cong et al.   TRENDS IN PLANT SCIENCE

A protein-independent fluorescent RNA aptamer reporter system for plant genetic engineering

(2020) Jiuyuan Bai et al.   Nature Communications

Genetic analyses of lodging resistance and yield provide insights into post‐Green‐Revolution breeding in rice

(2020) Zilong Guo et al.   PLANT BIOTECHNOLOGY JOURNAL

Function and Evolution of Upstream ORFs in Eukaryotes

(2019) Hong Zhang et al.   TRENDS IN BIOCHEMICAL SCIENCES

Magnesium supports nitrogen uptake through regulating NRT2.1/2.2 in soybean

(2019) Wen Ting Peng et al.   PLANT AND SOIL

Identification of loci controlling adaptation in Chinese soya bean landraces via a combination of conventional and bioclimatic GWAS

(2019) Ying‐hui Li et al.   PLANT BIOTECHNOLOGY JOURNAL

Natural variation in ZmFBL41 confers banded leaf and sheath blight resistance in maize

(2019) Ning Li et al.   NATURE GENETICS

Impacts of uORF codon identity and position on translation regulation

(2019) Yizhu Lin et al.   NUCLEIC ACIDS RESEARCH

Generation of a multiplex mutagenesis population via pooled CRISPR ‐Cas9 in soya bean

(2019) Mengyan Bai et al.   PLANT BIOTECHNOLOGY JOURNAL

Identification of transcription factors that bind to the 5′-UTR of the barley PHO2 gene

(2019) Paweł Sega et al.   PLANT MOLECULAR BIOLOGY

OUP accepted manuscript

(2018)   BIOINFORMATICS

Adaptation to Phosphate Scarcity: Tips from Arabidopsis Roots

(2018) Dolores Gutiérrez-Alanís et al.   TRENDS IN PLANT SCIENCE

Genome-wide maps of ribosomal occupancy provide insights into adaptive evolution and regulatory roles of uORFs during Drosophila development

(2018) Hong Zhang et al.   PLOS BIOLOGY

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files

(2018) Chi Zhang et al.   BIOINFORMATICS

A nodule-localized phosphate transporter GmPT7 plays an important role in enhancing symbiotic N2 fixation and yield in soybean

(2018) Liyu Chen et al.   NEW PHYTOLOGIST

Translation regulation in plants: an interesting past, an exciting present and a promising future

(2017) Catharina Merchante et al.   PLANT JOURNAL

A uORF Represses the Transcription Factor AtHB1 in Aerial Tissues to Avoid a Deleterious Phenotype

(2017) Pamela A. Ribone et al.   PLANT PHYSIOLOGY

Genotype Imputation with Millions of Reference Samples

(2016) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

The role of root size versus root efficiency in phosphorus acquisition in rice

(2016) Asako Mori et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Complex Regulation of Plant Phosphate Transporters and the Gap between Molecular Mechanisms and Practical Application: What Is Missing?

(2016) Mian Gu et al.   Molecular Plant

Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlings

(2016) Xianglan Wang et al.   NATURE GENETICS

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

The Rice CK2 Kinase Regulates Trafficking of Phosphate Transporters in Response to Phosphate Levels

(2015) Jieyu Chen et al.   PLANT CELL

Environmental controls on cultivated soybean phenotypic traits across China

(2014) Qianqian Li et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Duplicate and Conquer: Multiple Homologs of PHOSPHORUS-STARVATION TOLERANCE1 Enhance Phosphorus Acquisition and Sorghum Performance on Low-Phosphorus Soils

(2014) B. Hufnagel et al.   PLANT PHYSIOLOGY

Improvement of phosphorus efficiency in rice on the basis of understanding phosphate signaling and homeostasis

(2013) Ping Wu et al.   CURRENT OPINION IN PLANT BIOLOGY

Bioengineering and management for efficient phosphorus utilization in crops and pastures

(2012) Jiang Tian et al.   CURRENT OPINION IN BIOTECHNOLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency

(2012) Rico Gamuyao et al.   NATURE

The High-Affinity Phosphate Transporter GmPT5 Regulates Phosphate Transport to Nodules and Nodulation in Soybean

(2012) L. Qin et al.   PLANT PHYSIOLOGY

Functional Characterization of 14 Pht1 Family Genes in Yeast and Their Expressions in Response to Nutrient Starvation in Soybean

(2012) Lu Qin et al.   PLoS One

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

FaST linear mixed models for genome-wide association studies

(2011) Christoph Lippert et al.   NATURE METHODS

OsPHF1 Regulates the Plasma Membrane Localization of Low- and High-Affinity Inorganic Phosphate Transporters and Determines Inorganic Phosphate Uptake and Translocation in Rice

(2011) Jieyu Chen et al.   PLANT PHYSIOLOGY

QTL analysis of root traits as related to phosphorus efficiency in soybean

(2010) Quan Liang et al.   ANNALS OF BOTANY

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Acquisition or utilization, which is more critical for enhancing phosphorus efficiency in modern crops?

(2010) Xiurong Wang et al.   PLANT SCIENCE

Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana

(2010) Y. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner

(2009) Tünde Nyikó et al.   PLANT MOLECULAR BIOLOGY

Overexpressing AtPAP15 Enhances Phosphorus Efficiency in Soybean

(2009) X. Wang et al.   PLANT PHYSIOLOGY

Molecular and Biochemical Characterization of AtPAP15, a Purple Acid Phosphatase with Phytase Activity, in Arabidopsis

(2009) R. Kuang et al.   PLANT PHYSIOLOGY

Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation

(2008) Penghui Ai et al.   PLANT JOURNAL