Circulation of enterovirus D68 (EV-D68) causing respiratory illness in New South Wales, Australia, between August 2018 and November 2019

Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing

(2021) Ki Wook Kim et al.   Scientific Reports

Biennial Upsurge and Molecular Epidemiology of Enterovirus D68 Infection in New York, United States, 2014-2018

(2020) Victoria L. Gilrane et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Polio – The old foe and new challenges: An update for clinicians

(2020) Junchao Bao et al.   JOURNAL OF PAEDIATRICS AND CHILD HEALTH

IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring

(2020) Katrina L Kalantar et al.   GigaScience

Antibodies to Enteroviruses in Cerebrospinal Fluid of Patients with Acute Flaccid Myelitis

(2019) Nischay Mishra et al.   mBio

Neurotropism of Enterovirus D68 Isolates Is Independent of Sialic Acid and Is Not a Recently Acquired Phenotype

(2019) Amy B. Rosenfeld et al.   mBio

Next generation sequencing of human enterovirus strains from an outbreak of enterovirus A71 shows applicability to outbreak investigations

(2019) Sacha Stelzer-Braid et al.   JOURNAL OF CLINICAL VIROLOGY

Circulation of non-polio enteroviruses in 24 EU and EEA countries between 2015 and 2017: a retrospective surveillance study

(2019) Laura Bubba et al.   LANCET INFECTIOUS DISEASES

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

The association between acute flaccid myelitis (AFM) and Enterovirus D68 (EV-D68) – what is the evidence for causation?

(2018) Amalie Dyda et al.   Eurosurveillance

Amplification and next generation sequencing of near full-length human enteroviruses for identification and characterisation from clinical samples

(2018) Sonia R. Isaacs et al.   Scientific Reports

Outcome of paediatric acute flaccid myelitis associated with enterovirus D68: a case series

(2018) Amir Kirolos et al.   DEVELOPMENTAL MEDICINE AND CHILD NEUROLOGY

Epidemiology of hand, foot and mouth disease in China, 2008 to 2015 prior to the introduction of EV-A71 vaccine

(2017) Bingyi Yang et al.   Eurosurveillance

Predicting severe enterovirus 71 infection: Age, comorbidity, and parental behavior matter

(2017) Wen-Chan Huang et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

A mouse model of paralytic myelitis caused by enterovirus D68

(2017) Alison M. Hixon et al.   PLoS Pathogens

Outbreak of enterovirus D68 of the new B3 lineage in Stockholm, Sweden, August to September 2016

(2016) Robert Dyrdak et al.   Eurosurveillance

Global emergence of enterovirus D68: a systematic review

(2016) Charlotte Carina Holm-Hansen et al.   LANCET INFECTIOUS DISEASES

Enterovirus D68 Infections Associated with Severe Respiratory Illness in Elderly Patients and Emergence of a Novel Clade in Hong Kong

(2016) Susanna K. P. Lau et al.   Scientific Reports

Enterovirus D68 disease and molecular epidemiology in Australia

(2015) Avram Levy et al.   JOURNAL OF CLINICAL VIROLOGY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

An automated genotyping tool for enteroviruses and noroviruses

(2011) A. Kroneman et al.   JOURNAL OF CLINICAL VIROLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY