Amplification and next generation sequencing of near full-length human enteroviruses for identification and characterisation from clinical samples

Co-circulation of multiple subtypes of enterovirus A71 (EV- A71) genotype C, including novel recombinants characterised by use of whole genome sequencing (WGS), Denmark 2016

(2017) Sofie E Midgley et al.   Eurosurveillance

Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV)

(2017) Elliot J Lefkowitz et al.   NUCLEIC ACIDS RESEARCH

A method for near full-length amplification and sequencing for six hepatitis C virus genotypes

(2016) Rowena A. Bull et al.   BMC GENOMICS

Predominance of enterovirus B and echovirus 30 as cause of viral meningitis in a UK population

(2016) Christopher W. Holmes et al.   JOURNAL OF CLINICAL VIROLOGY

A Single Mutation in the VP1 of Enterovirus 71 Is Responsible for Increased Virulence and Neurotropism in Adult Interferon-Deficient Mice

(2016) Elizabeth A. Caine et al.   JOURNAL OF VIROLOGY

Global emergence of enterovirus D68: a systematic review

(2016) Charlotte Carina Holm-Hansen et al.   LANCET INFECTIOUS DISEASES

Enterovirus D68 receptor requirements unveiled by haploid genetics

(2016) Jim Baggen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Development and evaluation of a non-ribosomal random PCR and next-generation sequencing based assay for detection and sequencing of hand, foot and mouth disease pathogens

(2016) Anh To Nguyen et al.   Virology Journal

Enterovirus D68 Infections Associated with Severe Respiratory Illness in Elderly Patients and Emergence of a Novel Clade in Hong Kong

(2016) Susanna K. P. Lau et al.   Scientific Reports

Update on hand-foot-and-mouth disease

(2015) Daniel Ventarola et al.   CLINICS IN DERMATOLOGY

Basic reproduction number of coxsackievirus type A6 and A16 and enterovirus 71: estimates from outbreaks of hand, foot and mouth disease in Singapore, a tropical city-state

(2015) C. T. K. LIM et al.   EPIDEMIOLOGY AND INFECTION

Molecular Evolution and Intraclade Recombination of Enterovirus D68 during the 2014 Outbreak in the United States

(2015) Yi Tan et al.   JOURNAL OF VIROLOGY

Enterovirus D68 Infection

(2015) Susanna Esposito et al.   Viruses-Basel

Evolution and Emergence of Enteroviruses through Intra- and Inter-species Recombination: Plasticity and Phenotypic Impact of Modular Genetic Exchanges in the 5’ Untranslated Region

(2015) Claire Muslin et al.   PLoS Pathogens

Use of the 5' untranslated region and VP1 region to examine the molecular diversity in enterovirus B species

(2014) F. Zhou et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Coxsackievirus can persist in murine pancreas by deletion of 5′ terminal genomic sequences

(2014) Steven Tracy et al.   JOURNAL OF MEDICAL VIROLOGY

Long-range PCR in next-generation sequencing: comparison of six enzymes and evaluation on the MiSeq sequencer

(2014) Haiying Jia et al.   Scientific Reports

Specific primer amplification of the VP1 region directed by 5′ UTR sequence analysis: Enterovirus testing and identification in clinical samples from hand-foot-and-mouth disease patients

(2013) Shengxiang Ge et al.   JOURNAL OF VIROLOGICAL METHODS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Children With Islet Autoimmunity and Enterovirus Infection Demonstrate a Distinct Cytokine Profile

(2012) W.-C. G. Yeung et al.   DIABETES

Enterovirus Coinfection During an Outbreak of Hand, Foot, and Mouth Disease in Shandong, China

(2011) F. Yang et al.   CLINICAL INFECTIOUS DISEASES

Virology, epidemiology, pathogenesis, and control of enterovirus 71

(2010) Tom Solomon et al.   LANCET INFECTIOUS DISEASES

Pathogenesis of type 1 diabetes mellitus: interplay between enterovirus and host

(2010) Didier Hober et al.   Nature Reviews Endocrinology

The prevalence of enteroviral capsid protein vp1 immunostaining in pancreatic islets in human type 1 diabetes

(2009) S. J. Richardson et al.   DIABETOLOGIA

Direct identification of human enterovirus serotypes in cerebrospinal fluid by amplification and sequencing of the VP1 region

(2009) E.C. McWilliam Leitch et al.   JOURNAL OF CLINICAL VIROLOGY

5′ terminal deletions in the genome of a coxsackievirus B2 strain occurred naturally in human heart

(2008) Nora M. Chapman et al.   VIROLOGY