Virtual deep brain stimulation: Multiscale co-simulation of a spiking basal ganglia model and a whole-brain mean-field model with The Virtual Brain

Brain simulation as a cloud service: The Virtual Brain on EBRAINS

(2022) Michael Schirner et al.   NEUROIMAGE

BOLD Monitoring in the Neural Simulator ANNarchy

(2022) Oliver Maith et al.   Frontiers in Neuroinformatics

StimVision v2: Examples and Applications in Subthalamic Deep Brain Stimulation for Parkinson's Disease

(2021) Angela M. Noecker et al.   NEUROMODULATION

Dissociable Roles of Pallidal Neuron Subtypes in Regulating Motor Patterns

(2021) Qiaoling Cui et al.   JOURNAL OF NEUROSCIENCE

Sensory coding and contrast invariance emerge from the control of plastic inhibition over emergent selectivity

(2021) René Larisch et al.   PLoS Computational Biology

Functional and Structural Connectivity Patterns Associated with Clinical Outcomes in Deep Brain Stimulation of the Globus Pallidus Internus for Generalized Dystonia

(2020) L. Okromelidze et al.   AMERICAN JOURNAL OF NEURORADIOLOGY

Habit learning in hierarchical cortex–basal ganglia loops

(2020) Javier Baladron et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

A computational model‐based analysis of basal ganglia pathway changes in Parkinson’s disease inferred from resting‐state fMRI

(2020) Oliver Maith et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Subthalamic nucleus deep brain stimulation with a multiple independent constant current-controlled device in Parkinson's disease (INTREPID): a multicentre, double-blind, randomised, sham-controlled study

(2020) Jerrold L Vitek et al.   LANCET NEUROLOGY

Brain Network Simulations Indicate Effects of Neuregulin-1 Genotype on Excitation-Inhibition Balance in Cortical Dynamics

(2020) Pedro Costa Klein et al.   CEREBRAL CORTEX

Technology of deep brain stimulation: current status and future directions

(2020) Joachim K. Krauss et al.   Nature Reviews Neurology

Connectivity profile predictive of effective deep brain stimulation in obsessive compulsive disorder

(2019) Juan Carlos Baldermann et al.   BIOLOGICAL PSYCHIATRY

A review of basal ganglia circuits and physiology: Application to deep brain stimulation

(2019) Robert S. Eisinger et al.   PARKINSONISM & RELATED DISORDERS

The impact of modern-day neuroimaging on the field of deep brain stimulation

(2019) Andreas Horn   CURRENT OPINION IN NEUROLOGY

Network localization of cervical dystonia based on causal brain lesions

(2019) Daniel T Corp et al.   BRAIN

Optimization of surgical intervention outside the epileptogenic zone in the Virtual Epileptic Patient (VEP)

(2019) Sora An et al.   PLoS Computational Biology

Connectivity profile of thalamic deep brain stimulation to effectively treat essential tremor

(2019) Bassam Al-Fatly et al.   BRAIN

Deep brain stimulation induced normalization of the human functional connectome in Parkinson’s disease

(2019) Andreas Horn et al.   BRAIN

Linking Molecular Pathways and Large-Scale Computational Modeling to Assess Candidate Disease Mechanisms and Pharmacodynamics in Alzheimer's Disease

(2019) Leon Stefanovski et al.   Frontiers in Computational Neuroscience

Npas1+-Nkx2.1+ Neurons Are an Integral Part of the Cortico-pallido-cortical Loop

(2019) Zachary A. Abecassis et al.   JOURNAL OF NEUROSCIENCE

Holographic Reconstruction of Axonal Pathways in the Human Brain

(2019) Mikkel V. Petersen et al.   NEURON

Localizing parkinsonism based on focal brain lesions

(2018) Juho Joutsa et al.   BRAIN

Stimulation in Supplementary Motor Area Versus Motor Cortex for Freezing of Gait in Parkinson's Disease

(2018) Sang Jin Kim et al.   Journal of Clinical Neurology

Insights into Parkinson’s disease from computational models of the basal ganglia

(2018) Mark D Humphries et al.   JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY

A high-resolution probabilistic in vivo atlas of human subcortical brain nuclei

(2018) Wolfgang M. Pauli et al.   Scientific Data

On the role of cortex-basal ganglia interactions for category learning: A neuro-computational approach

(2018) Francesc Villagrasa et al.   JOURNAL OF NEUROSCIENCE

Differences in functional connectivity profiles as a predictor of response to anterior thalamic nucleus deep brain stimulation for epilepsy: a hypothesis for the mechanism of action and a potential biomarker for outcomes

(2018) Erik H. Middlebrooks et al.   Neurosurgical Focus

Sensorimotor subthalamic stimulation restores risk-reward trade-off in Parkinson's disease

(2018) Friederike Irmen et al.   MOVEMENT DISORDERS

Thinking Outside the Box (and Arrow): Current Themes in Striatal Dysfunction in Movement Disorders

(2018) Joshua L. Plotkin et al.   NEUROSCIENTIST

The subthalamic nucleus-external globus pallidus loop biases exploratory decisions towards known alternatives: a neuro-computational study

(2017) Javier Baladron et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Predictive Place-Cell Sequences for Goal-Finding Emerge from Goal Memory and the Cognitive Map: A Computational Model

(2017) Lorenz Gönner et al.   Frontiers in Computational Neuroscience

Uncovering the underlying mechanisms and whole-brain dynamics of deep brain stimulation for Parkinson’s disease

(2017) Victor M. Saenger et al.   Scientific Reports

A multi-modal parcellation of human cerebral cortex

(2016) Matthew F. Glasser et al.   NATURE

Transcranial direct current stimulation changes resting state functional connectivity: A large-scale brain network modeling study

(2016) Tim Kunze et al.   NEUROIMAGE

Identification of a direct GABAergic pallidocortical pathway in rodents

(2015) Michael C. Chen et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

A direct GABAergic output from the basal ganglia to frontal cortex

(2015) Arpiar Saunders et al.   NATURE

Therapeutic deep brain stimulation reduces cortical phase-amplitude coupling in Parkinson's disease

(2015) Coralie de Hemptinne et al.   NATURE NEUROSCIENCE

Lead-DBS: A toolbox for deep brain stimulation electrode localizations and visualizations

(2015) Andreas Horn et al.   NEUROIMAGE

Implementation of a new parcellation of the orbitofrontal cortex in the automated anatomical labeling atlas

(2015) Edmund T. Rolls et al.   NEUROIMAGE

Long-term efficacy and safety of thalamic stimulation for drug-resistant partial epilepsy

(2015) V. Salanova et al.   NEUROLOGY

Mechanism of Deep Brain Stimulation

(2015) Satomi Chiken et al.   NEUROSCIENTIST

ANNarchy: a code generation approach to neural simulations on parallel hardware

(2015) Julien Vitay et al.   Frontiers in Neuroinformatics

Uncovering the role of the insula in non-motor symptoms of Parkinson’s disease

(2014) Leigh Christopher et al.   BRAIN

Quadruple deep brain stimulation in Huntington’s disease, targeting pallidum and subthalamic nucleus: case report and review of the literature

(2014) D. Gruber et al.   JOURNAL OF NEURAL TRANSMISSION

Motor Cortical Correlates of Arm Resting in the Context of a Reaching Task and Implications for Prosthetic Control

(2014) M. Velliste et al.   JOURNAL OF NEUROSCIENCE

How Local Excitation-Inhibition Ratio Impacts the Whole Brain Dynamics

(2014) G. Deco et al.   JOURNAL OF NEUROSCIENCE

Parkinson's Disease, the Subthalamic Nucleus, Inhibition, and Impulsivity

(2014) Marjan Jahanshahi et al.   MOVEMENT DISORDERS

Neural Plasticity in Human Brain Connectivity: The Effects of Long Term Deep Brain Stimulation of the Subthalamic Nucleus in Parkinson’s Disease

(2014) Tim J. van Hartevelt et al.   PLoS One

Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited

(2014) Cibu Thomas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Resting-State Functional Connectivity Emerges from Structurally and Dynamically Shaped Slow Linear Fluctuations

(2013) G. Deco et al.   JOURNAL OF NEUROSCIENCE

Supplementary motor area stimulation for Parkinson disease: A randomized controlled study

(2013) Y. Shirota et al.   NEUROLOGY

Cortical information flow in Parkinson's disease: a composite network/field model

(2013) Cliff C. Kerr et al.   Frontiers in Computational Neuroscience

Mean-field models for heterogeneous networks of two-dimensional integrate and fire neurons

(2013) Wilten Nicola et al.   Frontiers in Computational Neuroscience

Functional Neuroanatomy of the Basal Ganglia

(2013) J. L. Lanciego et al.   Cold Spring Harbor Perspectives in Medicine

The Virtual Brain: a simulator of primate brain network dynamics

(2013) Paula Sanz Leon et al.   Frontiers in Neuroinformatics

High frequency deep brain stimulation attenuates subthalamic and cortical rhythms in Parkinson's disease

(2012) Diane Whitmer et al.   Frontiers in Human Neuroscience

White matter integrity, fiber count, and other fallacies: The do's and don'ts of diffusion MRI

(2012) Derek K. Jones et al.   NEUROIMAGE

Comprehensive in vivo Mapping of the Human Basal Ganglia and Thalamic Connectome in Individuals Using 7T MRI

(2012) Christophe Lenglet et al.   PLoS One

Therapeutic Subthalamic Nucleus Deep Brain Stimulation Reverses Cortico-Thalamic Coupling during Voluntary Movements in Parkinson's Disease

(2012) Josh Kahan et al.   PLoS One

Double-blind clinical trial of thalamic stimulation in patients with Tourette syndrome

(2011) L. Ackermans et al.   BRAIN

Subthalamic deep brain stimulation increases pallidal firing rate and regularity

(2011) René Reese et al.   EXPERIMENTAL NEUROLOGY

Effects of dopamine depletion on information flow between the subthalamic nucleus and external globus pallidus

(2011) Ana V. Cruz et al.   JOURNAL OF NEUROPHYSIOLOGY

Deep-brain stimulation of the nucleus accumbens in obsessive compulsive disorder: clinical, surgical and electrophysiological considerations in two consecutive patients

(2010) Angelo Franzini et al.   NEUROLOGICAL SCIENCES

Initial clinical manifestations of Parkinson's disease: features and pathophysiological mechanisms

(2009) Maria C Rodriguez-Oroz et al.   LANCET NEUROLOGY

The supplementary motor area contributes to the timing of the anticipatory postural adjustment during step initiation in participants with and without Parkinson's disease

(2009) J.V. Jacobs et al.   NEUROSCIENCE

Successful Treatment of Chronic Resistant Alcoholism by Deep Brain Stimulation of Nucleus Accumbens: First Experience with Three Cases

(2009) U. J. Müller et al.   PHARMACOPSYCHIATRY

PyNEST: A convenient interface to the NEST simulator

(2009) Jochen M Eppler   Frontiers in Neuroinformatics

Thalamocortical Relay Fidelity Varies Across Subthalamic Nucleus Deep Brain Stimulation Protocols in a Data-Driven Computational Model

(2008) Yixin Guo et al.   JOURNAL OF NEUROPHYSIOLOGY

High-Frequency Stimulation of the Subthalamic Nucleus Suppresses Oscillatory   Activity in Patients with Parkinson's Disease in Parallel with Improvement in Motor Performance

(2008) A. A. Kuhn et al.   JOURNAL OF NEUROSCIENCE

LONG‐TERM ELECTRICAL CAPSULAR STIMULATION IN PATIENTS WITH OBSESSIVE‐COMPULSIVE DISORDER

(2008) Bart J. Nuttin et al.   NEUROSURGERY